Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC010342.1-201ENST00000514047 877 ntBASIC4.13□□□□□ -1.75
C9orf72Q96LT7 RNA5SP315-201ENST00000516340 116 ntBASIC4.13□□□□□ -1.75
C9orf72Q96LT7 RNA5SP312-201ENST00000517068 116 ntBASIC4.13□□□□□ -1.75
C9orf72Q96LT7 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.13□□□□□ -1.75
C9orf72Q96LT7 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.13□□□□□ -1.75
C9orf72Q96LT7 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.13□□□□□ -1.75
C9orf72Q96LT7 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.13□□□□□ -1.75
C9orf72Q96LT7 AC084824.1-201ENST00000550917 1005 ntBASIC4.13□□□□□ -1.75
C9orf72Q96LT7 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.13□□□□□ -1.75
C9orf72Q96LT7 AC022968.1-201ENST00000567372 442 ntBASIC4.13□□□□□ -1.75
C9orf72Q96LT7 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.13□□□□□ -1.75
C9orf72Q96LT7 AC020914.4-201ENST00000597690 277 ntBASIC4.13□□□□□ -1.75
C9orf72Q96LT7 MRPS35P3-201ENST00000603189 709 ntBASIC4.13□□□□□ -1.75
C9orf72Q96LT7 AC025946.2-201ENST00000603398 234 ntBASIC4.13□□□□□ -1.75
C9orf72Q96LT7 MIR486-1-201ENST00000612171 68 ntBASIC4.13□□□□□ -1.75
C9orf72Q96LT7 RNA5SP196-201ENST00000625967 102 ntBASIC4.13□□□□□ -1.75
C9orf72Q96LT7 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.13□□□□□ -1.75
C9orf72Q96LT7 AC116667.1-201ENST00000604855 2072 ntBASIC4.13□□□□□ -1.75
C9orf72Q96LT7 AC087565.3-202ENST00000642085 1603 ntBASIC4.13□□□□□ -1.75
C9orf72Q96LT7 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.13□□□□□ -1.75
C9orf72Q96LT7 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
C9orf72Q96LT7 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 Y_RNA.126-201ENST00000363382 111 ntBASIC4.12□□□□□ -1.75
C9orf72Q96LT7 RNU1-13P-201ENST00000384499 162 ntBASIC4.12□□□□□ -1.75
C9orf72Q96LT7 MIR3074-201ENST00000384885 81 ntBASIC4.12□□□□□ -1.75
C9orf72Q96LT7 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 RN7SKP182-201ENST00000410772 298 ntBASIC4.12□□□□□ -1.75
C9orf72Q96LT7 AC048351.1-201ENST00000420064 602 ntBASIC4.12□□□□□ -1.75
C9orf72Q96LT7 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 OR4C10P-201ENST00000434991 931 ntBASIC4.12□□□□□ -1.75
C9orf72Q96LT7 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 AC020898.1-201ENST00000474167 787 ntBASIC4.12□□□□□ -1.75
C9orf72Q96LT7 RPL29P14-201ENST00000495837 428 ntBASIC4.12□□□□□ -1.75
C9orf72Q96LT7 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 AC026726.1-201ENST00000512859 601 ntBASIC4.12□□□□□ -1.75
C9orf72Q96LT7 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 RNA5SP143-201ENST00000516936 115 ntBASIC4.12□□□□□ -1.75
C9orf72Q96LT7 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.12□□□□□ -1.75
C9orf72Q96LT7 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 AC006116.5-201ENST00000591936 559 ntBASIC4.12□□□□□ -1.75
C9orf72Q96LT7 VN1R85P-201ENST00000601587 426 ntBASIC4.12□□□□□ -1.75
C9orf72Q96LT7 AC090953.1-201ENST00000604305 1092 ntBASIC4.12□□□□□ -1.75
C9orf72Q96LT7 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 AC024941.1-201ENST00000612250 334 ntBASIC4.12□□□□□ -1.75
C9orf72Q96LT7 AC004825.2-201ENST00000616634 455 ntBASIC4.12□□□□□ -1.75
C9orf72Q96LT7 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 AC083899.2-201ENST00000423285 1376 ntBASIC4.12□□□□□ -1.75
C9orf72Q96LT7 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.12□□□□□ -1.75
C9orf72Q96LT7 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
C9orf72Q96LT7 FAM35DP-201ENST00000323387 2712 ntBASIC4.11□□□□□ -1.75
C9orf72Q96LT7 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
C9orf72Q96LT7 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
C9orf72Q96LT7 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.11□□□□□ -1.75
C9orf72Q96LT7 RNU6-304P-201ENST00000364855 107 ntBASIC4.11□□□□□ -1.75
C9orf72Q96LT7 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
C9orf72Q96LT7 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.11□□□□□ -1.75
C9orf72Q96LT7 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
C9orf72Q96LT7 DPY19L1P2-201ENST00000426647 915 ntBASIC4.11□□□□□ -1.75
C9orf72Q96LT7 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.11□□□□□ -1.75
C9orf72Q96LT7 USP12PY-201ENST00000427677 1064 ntBASIC4.11□□□□□ -1.75
C9orf72Q96LT7 NPM1P34-201ENST00000428821 893 ntBASIC4.11□□□□□ -1.75
C9orf72Q96LT7 COX6B1P7-201ENST00000430845 235 ntBASIC4.11□□□□□ -1.75
C9orf72Q96LT7 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.11□□□□□ -1.75
C9orf72Q96LT7 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.11□□□□□ -1.75
C9orf72Q96LT7 HSFY6P-201ENST00000445573 403 ntBASIC4.11□□□□□ -1.75
C9orf72Q96LT7 HMGB1P16-201ENST00000447155 540 ntBASIC4.11□□□□□ -1.75
C9orf72Q96LT7 OR7L1P-201ENST00000456181 380 ntBASIC4.11□□□□□ -1.75
C9orf72Q96LT7 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.11□□□□□ -1.75
C9orf72Q96LT7 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.11□□□□□ -1.75
C9orf72Q96LT7 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
C9orf72Q96LT7 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.11□□□□□ -1.75
C9orf72Q96LT7 IGLVIV-53-201ENST00000520107 367 ntBASIC4.11□□□□□ -1.75
C9orf72Q96LT7 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.11□□□□□ -1.75
C9orf72Q96LT7 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.11□□□□□ -1.75
C9orf72Q96LT7 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.11□□□□□ -1.75
C9orf72Q96LT7 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.11□□□□□ -1.75
C9orf72Q96LT7 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.11□□□□□ -1.75
C9orf72Q96LT7 OR6R2P-201ENST00000609216 300 ntBASIC4.11□□□□□ -1.75
C9orf72Q96LT7 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.11□□□□□ -1.75
C9orf72Q96LT7 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms