Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.78□□□□□ -1.48
ERCC4Q92889 AL008729.2-201ENST00000606393 473 ntBASIC5.78□□□□□ -1.48
ERCC4Q92889 AC131235.4-201ENST00000609288 620 ntBASIC5.78□□□□□ -1.48
ERCC4Q92889 AC109309.2-201ENST00000612597 332 ntBASIC5.78□□□□□ -1.48
ERCC4Q92889 AC037198.3-201ENST00000616754 526 ntBASIC5.78□□□□□ -1.48
ERCC4Q92889 AL121890.2-201ENST00000617644 465 ntBASIC5.78□□□□□ -1.48
ERCC4Q92889 AC005840.5-201ENST00000619166 599 ntBASIC5.78□□□□□ -1.48
ERCC4Q92889 MIR6886-201ENST00000619864 61 ntBASIC5.78□□□□□ -1.48
ERCC4Q92889 AL607023.1-201ENST00000620045 248 ntBASIC5.78□□□□□ -1.48
ERCC4Q92889 AC009878.1-201ENST00000621819 340 ntBASIC5.78□□□□□ -1.48
ERCC4Q92889 AC116618.1-201ENST00000634617 774 ntBASIC5.78□□□□□ -1.48
ERCC4Q92889 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.78□□□□□ -1.48
ERCC4Q92889 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.78□□□□□ -1.48
ERCC4Q92889 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
ERCC4Q92889 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
ERCC4Q92889 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
ERCC4Q92889 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.78□□□□□ -1.48
ERCC4Q92889 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
ERCC4Q92889 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.78□□□□□ -1.48
ERCC4Q92889 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.48
ERCC4Q92889 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
ERCC4Q92889 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.77□□□□□ -1.49
ERCC4Q92889 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.77□□□□□ -1.49
ERCC4Q92889 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
ERCC4Q92889 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.77□□□□□ -1.49
ERCC4Q92889 AC109315.1-201ENST00000584143 1347 ntBASIC5.77□□□□□ -1.49
ERCC4Q92889 AC011477.1-204ENST00000623416 1325 ntBASIC5.77□□□□□ -1.49
ERCC4Q92889 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ERCC4Q92889 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ERCC4Q92889 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ERCC4Q92889 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
ERCC4Q92889 Y_RNA.408-201ENST00000383987 102 ntBASIC5.77□□□□□ -1.49
ERCC4Q92889 AL078599.1-201ENST00000402075 293 ntBASIC5.77□□□□□ -1.49
ERCC4Q92889 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.77□□□□□ -1.49
ERCC4Q92889 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.77□□□□□ -1.49
ERCC4Q92889 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.77□□□□□ -1.49
ERCC4Q92889 CENPIP1-201ENST00000425713 902 ntBASIC5.77□□□□□ -1.49
ERCC4Q92889 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC5.77□□□□□ -1.49
ERCC4Q92889 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.77□□□□□ -1.49
ERCC4Q92889 AL590103.1-201ENST00000434488 307 ntBASIC5.77□□□□□ -1.49
ERCC4Q92889 MTCO1P19-201ENST00000443487 500 ntBASIC5.77□□□□□ -1.49
ERCC4Q92889 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.77□□□□□ -1.49
ERCC4Q92889 RPL31P44-201ENST00000447680 377 ntBASIC5.77□□□□□ -1.49
ERCC4Q92889 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.77□□□□□ -1.49
ERCC4Q92889 NIP7P2-201ENST00000485801 544 ntBASIC5.77□□□□□ -1.49
ERCC4Q92889 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.77□□□□□ -1.49
ERCC4Q92889 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.77□□□□□ -1.49
ERCC4Q92889 AC022447.1-201ENST00000515358 464 ntBASIC5.77□□□□□ -1.49
ERCC4Q92889 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.77□□□□□ -1.49
ERCC4Q92889 RNA5SP362-201ENST00000516048 118 ntBASIC5.77□□□□□ -1.49
ERCC4Q92889 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.77□□□□□ -1.49
ERCC4Q92889 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.77□□□□□ -1.49
ERCC4Q92889 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.77□□□□□ -1.49
ERCC4Q92889 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.77□□□□□ -1.49
ERCC4Q92889 AC007954.1-201ENST00000554198 494 ntBASIC5.77□□□□□ -1.49
ERCC4Q92889 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.77□□□□□ -1.49
ERCC4Q92889 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.77□□□□□ -1.49
ERCC4Q92889 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.77□□□□□ -1.49
ERCC4Q92889 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.77□□□□□ -1.49
ERCC4Q92889 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ERCC4Q92889 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.77□□□□□ -1.49
ERCC4Q92889 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.77□□□□□ -1.49
ERCC4Q92889 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.77□□□□□ -1.49
ERCC4Q92889 AP000894.4-201ENST00000610185 483 ntBASIC5.77□□□□□ -1.49
ERCC4Q92889 AC008083.4-201ENST00000615076 444 ntBASIC5.77□□□□□ -1.49
ERCC4Q92889 AC009509.4-201ENST00000619202 509 ntBASIC5.77□□□□□ -1.49
ERCC4Q92889 AL590240.3-201ENST00000621416 943 ntBASIC5.77□□□□□ -1.49
ERCC4Q92889 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.77□□□□□ -1.49
ERCC4Q92889 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.77□□□□□ -1.49
ERCC4Q92889 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ERCC4Q92889 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ERCC4Q92889 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ERCC4Q92889 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.77□□□□□ -1.49
ERCC4Q92889 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ERCC4Q92889 SCN1A-220ENST00000641603 12506 ntBASIC5.77□□□□□ -1.49
ERCC4Q92889 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
ERCC4Q92889 AC011447.7-201ENST00000624228 1590 ntBASIC5.76□□□□□ -1.49
ERCC4Q92889 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
ERCC4Q92889 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ERCC4Q92889 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ERCC4Q92889 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
ERCC4Q92889 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ERCC4Q92889 HMGB1P5-201ENST00000255320 642 ntBASIC5.76□□□□□ -1.49
ERCC4Q92889 AL672167.1-206ENST00000356293 943 ntBASIC5.76□□□□□ -1.49
ERCC4Q92889 RNA5SP132-201ENST00000364725 118 ntBASIC5.76□□□□□ -1.49
ERCC4Q92889 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ERCC4Q92889 OR3A2-201ENST00000408891 1076 ntBASIC5.76□□□□□ -1.49
ERCC4Q92889 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.76□□□□□ -1.49
ERCC4Q92889 RN7SKP229-201ENST00000410465 302 ntBASIC5.76□□□□□ -1.49
ERCC4Q92889 RN7SKP222-201ENST00000410651 315 ntBASIC5.76□□□□□ -1.49
ERCC4Q92889 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.76□□□□□ -1.49
ERCC4Q92889 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.76□□□□□ -1.49
ERCC4Q92889 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.76□□□□□ -1.49
ERCC4Q92889 AL133325.1-201ENST00000421090 382 ntBASIC5.76□□□□□ -1.49
ERCC4Q92889 DPRXP1-201ENST00000426312 460 ntBASIC5.76□□□□□ -1.49
ERCC4Q92889 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.76□□□□□ -1.49
ERCC4Q92889 C8orf59P1-201ENST00000429930 303 ntBASIC5.76□□□□□ -1.49
ERCC4Q92889 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.76□□□□□ -1.49
ERCC4Q92889 BX323845.1-201ENST00000432417 179 ntBASIC5.76□□□□□ -1.49
ERCC4Q92889 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms