Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 TPT1P12-201ENST00000448968 492 ntBASIC4.18□□□□□ -1.74
CDH6P55285 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH6P55285 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH6P55285 AL645939.1-201ENST00000453429 797 ntBASIC4.18□□□□□ -1.74
CDH6P55285 RPL23AP2-201ENST00000471227 466 ntBASIC4.18□□□□□ -1.74
CDH6P55285 PCNAP1-201ENST00000505363 709 ntBASIC4.18□□□□□ -1.74
CDH6P55285 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.18□□□□□ -1.74
CDH6P55285 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH6P55285 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH6P55285 HIGD1AP5-201ENST00000529959 259 ntBASIC4.18□□□□□ -1.74
CDH6P55285 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH6P55285 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH6P55285 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH6P55285 OR1AB1P-201ENST00000585564 761 ntBASIC4.18□□□□□ -1.74
CDH6P55285 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDH6P55285 AC010680.3-201ENST00000604215 520 ntBASIC4.18□□□□□ -1.74
CDH6P55285 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH6P55285 AC139769.3-201ENST00000618383 175 ntBASIC4.18□□□□□ -1.74
CDH6P55285 AC090506.2-201ENST00000624521 419 ntBASIC4.18□□□□□ -1.74
CDH6P55285 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH6P55285 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDH6P55285 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH6P55285 AL359715.4-201ENST00000606629 1436 ntBASIC4.18□□□□□ -1.74
CDH6P55285 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CDH6P55285 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDH6P55285 AC096656.1-201ENST00000623826 1364 ntBASIC4.17□□□□□ -1.74
CDH6P55285 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
CDH6P55285 AL118496.1-201ENST00000440201 1812 ntBASIC4.17□□□□□ -1.74
CDH6P55285 RPS26P8-201ENST00000393490 348 ntBASIC4.17□□□□□ -1.74
CDH6P55285 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CDH6P55285 AL049693.1-201ENST00000402760 611 ntBASIC4.17□□□□□ -1.74
CDH6P55285 HMGB3P19-201ENST00000403971 560 ntBASIC4.17□□□□□ -1.74
CDH6P55285 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.17□□□□□ -1.74
CDH6P55285 AC092647.1-201ENST00000420654 287 ntBASIC4.17□□□□□ -1.74
CDH6P55285 COX6CP17-201ENST00000421389 185 ntBASIC4.17□□□□□ -1.74
CDH6P55285 AC009965.2-201ENST00000425328 970 ntBASIC4.17□□□□□ -1.74
CDH6P55285 NPM1P24-201ENST00000428039 894 ntBASIC4.17□□□□□ -1.74
CDH6P55285 FTH1P6-201ENST00000430768 320 ntBASIC4.17□□□□□ -1.74
CDH6P55285 NDUFA5P10-201ENST00000432147 357 ntBASIC4.17□□□□□ -1.74
CDH6P55285 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.17□□□□□ -1.74
CDH6P55285 AL627224.1-201ENST00000448334 444 ntBASIC4.17□□□□□ -1.74
CDH6P55285 RPS6P4-201ENST00000494693 758 ntBASIC4.17□□□□□ -1.74
CDH6P55285 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.17□□□□□ -1.74
CDH6P55285 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDH6P55285 IGBP1P5-201ENST00000507524 1000 ntBASIC4.17□□□□□ -1.74
CDH6P55285 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.17□□□□□ -1.74
CDH6P55285 IGKV2D-10-201ENST00000520194 281 ntBASIC4.17□□□□□ -1.74
CDH6P55285 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.17□□□□□ -1.74
CDH6P55285 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.17□□□□□ -1.74
CDH6P55285 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.17□□□□□ -1.74
CDH6P55285 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.17□□□□□ -1.74
CDH6P55285 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.17□□□□□ -1.74
CDH6P55285 AC023043.4-201ENST00000612081 449 ntBASIC4.17□□□□□ -1.74
CDH6P55285 AL591424.2-201ENST00000617023 128 ntBASIC4.17□□□□□ -1.74
CDH6P55285 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CDH6P55285 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CDH6P55285 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDH6P55285 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDH6P55285 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CDH6P55285 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CDH6P55285 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.17□□□□□ -1.74
CDH6P55285 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDH6P55285 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.16□□□□□ -1.74
CDH6P55285 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.16□□□□□ -1.74
CDH6P55285 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH6P55285 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CDH6P55285 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.16□□□□□ -1.74
CDH6P55285 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.16□□□□□ -1.74
CDH6P55285 SNORA70C-201ENST00000384538 135 ntBASIC4.16□□□□□ -1.74
CDH6P55285 MIR7-1-201ENST00000384871 110 ntBASIC4.16□□□□□ -1.74
CDH6P55285 RNF19BPX-201ENST00000426224 625 ntBASIC4.16□□□□□ -1.74
CDH6P55285 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.16□□□□□ -1.74
CDH6P55285 AC011742.1-201ENST00000431448 434 ntBASIC4.16□□□□□ -1.74
CDH6P55285 AL606490.7-201ENST00000433136 191 ntBASIC4.16□□□□□ -1.74
CDH6P55285 AL356276.2-201ENST00000435919 558 ntBASIC4.16□□□□□ -1.74
CDH6P55285 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH6P55285 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.16□□□□□ -1.74
CDH6P55285 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH6P55285 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH6P55285 FABP3P2-201ENST00000453169 399 ntBASIC4.16□□□□□ -1.74
CDH6P55285 RN7SL860P-201ENST00000473738 223 ntBASIC4.16□□□□□ -1.74
CDH6P55285 AC021087.2-201ENST00000504656 1203 ntBASIC4.16□□□□□ -1.74
CDH6P55285 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CDH6P55285 AC108120.2-201ENST00000512973 294 ntBASIC4.16□□□□□ -1.74
CDH6P55285 RNU6-1308P-201ENST00000516817 103 ntBASIC4.16□□□□□ -1.74
CDH6P55285 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH6P55285 HIGD1AP18-201ENST00000520730 278 ntBASIC4.16□□□□□ -1.74
CDH6P55285 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH6P55285 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CDH6P55285 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH6P55285 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
CDH6P55285 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.16□□□□□ -1.74
CDH6P55285 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.16□□□□□ -1.74
CDH6P55285 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.16□□□□□ -1.74
CDH6P55285 AC025884.1-201ENST00000556034 378 ntBASIC4.16□□□□□ -1.74
CDH6P55285 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CDH6P55285 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.16□□□□□ -1.74
CDH6P55285 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.16□□□□□ -1.74
CDH6P55285 AC135803.1-201ENST00000608748 565 ntBASIC4.16□□□□□ -1.74
CDH6P55285 MIR6868-201ENST00000611215 58 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms