Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AC016065.2-201ENST00000514530 444 ntBASIC4.99□□□□□ -1.61
BDNFP23560 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.99□□□□□ -1.61
BDNFP23560 AC104057.1-201ENST00000515547 497 ntBASIC4.99□□□□□ -1.61
BDNFP23560 RNU5A-7P-201ENST00000515979 116 ntBASIC4.99□□□□□ -1.61
BDNFP23560 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
BDNFP23560 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.99□□□□□ -1.61
BDNFP23560 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.99□□□□□ -1.61
BDNFP23560 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
BDNFP23560 AC135001.1-201ENST00000544546 283 ntBASIC4.99□□□□□ -1.61
BDNFP23560 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.99□□□□□ -1.61
BDNFP23560 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.99□□□□□ -1.61
BDNFP23560 AC074051.3-201ENST00000570238 358 ntBASIC4.99□□□□□ -1.61
BDNFP23560 CYCSP40-201ENST00000575927 294 ntBASIC4.99□□□□□ -1.61
BDNFP23560 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.99□□□□□ -1.61
BDNFP23560 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.99□□□□□ -1.61
BDNFP23560 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
BDNFP23560 YWHAQP7-201ENST00000603536 658 ntBASIC4.99□□□□□ -1.61
BDNFP23560 AC008745.1-201ENST00000604064 271 ntBASIC4.99□□□□□ -1.61
BDNFP23560 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
BDNFP23560 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.99□□□□□ -1.61
BDNFP23560 OR7A19P-201ENST00000608051 733 ntBASIC4.99□□□□□ -1.61
BDNFP23560 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
BDNFP23560 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.99□□□□□ -1.61
BDNFP23560 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
BDNFP23560 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
BDNFP23560 Z98755.1-201ENST00000407015 1384 ntBASIC4.99□□□□□ -1.61
BDNFP23560 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
BDNFP23560 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
BDNFP23560 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
BDNFP23560 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
BDNFP23560 AL355578.1-201ENST00000607405 1328 ntBASIC4.98□□□□□ -1.61
BDNFP23560 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.98□□□□□ -1.61
BDNFP23560 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.98□□□□□ -1.61
BDNFP23560 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
BDNFP23560 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
BDNFP23560 AC008725.1-201ENST00000605123 2263 ntBASIC4.98□□□□□ -1.61
BDNFP23560 AC000374.1-201ENST00000434698 1745 ntBASIC4.98□□□□□ -1.61
BDNFP23560 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.98□□□□□ -1.61
BDNFP23560 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
BDNFP23560 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
BDNFP23560 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
BDNFP23560 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
BDNFP23560 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
BDNFP23560 AL590762.2-201ENST00000395798 571 ntBASIC4.98□□□□□ -1.61
BDNFP23560 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.98□□□□□ -1.61
BDNFP23560 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.98□□□□□ -1.61
BDNFP23560 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
BDNFP23560 AC140479.3-201ENST00000418944 1126 ntBASIC4.98□□□□□ -1.61
BDNFP23560 MTCO2P1-201ENST00000424648 477 ntBASIC4.98□□□□□ -1.61
BDNFP23560 RPL36P19-201ENST00000430744 301 ntBASIC4.98□□□□□ -1.61
BDNFP23560 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.98□□□□□ -1.61
BDNFP23560 HMGB1P45-201ENST00000435986 653 ntBASIC4.98□□□□□ -1.61
BDNFP23560 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.98□□□□□ -1.61
BDNFP23560 H2AFZP6-201ENST00000444403 394 ntBASIC4.98□□□□□ -1.61
BDNFP23560 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.98□□□□□ -1.61
BDNFP23560 SEPT14P24-201ENST00000447236 180 ntBASIC4.98□□□□□ -1.61
BDNFP23560 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.98□□□□□ -1.61
BDNFP23560 BTF3P6-201ENST00000448054 499 ntBASIC4.98□□□□□ -1.61
BDNFP23560 Z95152.1-201ENST00000453556 656 ntBASIC4.98□□□□□ -1.61
BDNFP23560 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.98□□□□□ -1.61
BDNFP23560 AC005726.1-201ENST00000494679 427 ntBASIC4.98□□□□□ -1.61
BDNFP23560 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.98□□□□□ -1.61
BDNFP23560 AC016550.1-201ENST00000505348 785 ntBASIC4.98□□□□□ -1.61
BDNFP23560 RNA5SP249-201ENST00000516127 99 ntBASIC4.98□□□□□ -1.61
BDNFP23560 RNU6-416P-201ENST00000516265 103 ntBASIC4.98□□□□□ -1.61
BDNFP23560 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.98□□□□□ -1.61
BDNFP23560 AP004242.1-201ENST00000533701 349 ntBASIC4.98□□□□□ -1.61
BDNFP23560 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.98□□□□□ -1.61
BDNFP23560 AL352979.3-201ENST00000553515 247 ntBASIC4.98□□□□□ -1.61
BDNFP23560 GLRXP2-201ENST00000555594 321 ntBASIC4.98□□□□□ -1.61
BDNFP23560 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.98□□□□□ -1.61
BDNFP23560 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.98□□□□□ -1.61
BDNFP23560 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.98□□□□□ -1.61
BDNFP23560 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.98□□□□□ -1.61
BDNFP23560 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
BDNFP23560 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
BDNFP23560 AL022393.1-201ENST00000625142 1677 ntBASIC4.98□□□□□ -1.61
BDNFP23560 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
BDNFP23560 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.98□□□□□ -1.61
BDNFP23560 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
BDNFP23560 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
BDNFP23560 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.97□□□□□ -1.61
BDNFP23560 AC012020.1-201ENST00000624541 1728 ntBASIC4.97□□□□□ -1.61
BDNFP23560 FAM91A3P-201ENST00000456826 2544 ntBASIC4.97□□□□□ -1.61
BDNFP23560 AP000542.2-201ENST00000623199 6179 ntBASIC4.97□□□□□ -1.61
BDNFP23560 AL136164.3-201ENST00000624429 3978 ntBASIC4.97□□□□□ -1.61
BDNFP23560 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
BDNFP23560 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
BDNFP23560 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
BDNFP23560 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
BDNFP23560 AC007685.1-201ENST00000329806 452 ntBASIC4.97□□□□□ -1.61
BDNFP23560 SNORA70F-201ENST00000384142 135 ntBASIC4.97□□□□□ -1.61
BDNFP23560 RNA5SP332-201ENST00000391063 115 ntBASIC4.97□□□□□ -1.61
BDNFP23560 SFR1P1-201ENST00000403720 688 ntBASIC4.97□□□□□ -1.61
BDNFP23560 ARL4AP5-201ENST00000404372 599 ntBASIC4.97□□□□□ -1.61
BDNFP23560 RPS4XP9-201ENST00000405151 780 ntBASIC4.97□□□□□ -1.61
BDNFP23560 AL355615.1-201ENST00000406187 641 ntBASIC4.97□□□□□ -1.61
BDNFP23560 RN7SKP267-201ENST00000410381 285 ntBASIC4.97□□□□□ -1.61
BDNFP23560 OR51B3P-201ENST00000412287 913 ntBASIC4.97□□□□□ -1.61
BDNFP23560 EI24P1-201ENST00000416584 867 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms