Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AL356967.1-201ENST00000406305 431 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 RNU4-74P-201ENST00000411280 161 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.16□□□□□ -1.74
XRCC1P18887 AC048351.1-201ENST00000420064 602 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 COX6CP15-201ENST00000426313 211 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.16□□□□□ -1.74
XRCC1P18887 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.16□□□□□ -1.74
XRCC1P18887 RPL34P26-201ENST00000445636 354 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 AC114755.5-201ENST00000447760 831 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 EIF4A1P11-201ENST00000451239 222 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.16□□□□□ -1.74
XRCC1P18887 RNU6-1218P-201ENST00000458990 108 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 METTL15P1-201ENST00000481421 1045 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 AC010627.1-201ENST00000503819 1294 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.16□□□□□ -1.74
XRCC1P18887 RNA5SP519-201ENST00000516480 119 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.16□□□□□ -1.74
XRCC1P18887 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.16□□□□□ -1.74
XRCC1P18887 AL109766.1-201ENST00000555080 552 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 AC007224.1-201ENST00000564410 144 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 AC022884.3-201ENST00000579571 248 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 AC006116.5-201ENST00000591936 559 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 AC123786.2-201ENST00000603459 275 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 SUMO2P14-201ENST00000604488 293 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 AC068831.8-201ENST00000620171 435 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 AL445363.3-201ENST00000623080 671 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.16□□□□□ -1.74
XRCC1P18887 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.16□□□□□ -1.74
XRCC1P18887 MIR6715B-201ENST00000637172 77 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 AC009229.4-201ENST00000623854 1947 ntBASIC4.16□□□□□ -1.74
XRCC1P18887 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.16□□□□□ -1.74
XRCC1P18887 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.16□□□□□ -1.74
XRCC1P18887 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
XRCC1P18887 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.16□□□□□ -1.74
XRCC1P18887 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.16□□□□□ -1.74
XRCC1P18887 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
XRCC1P18887 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
XRCC1P18887 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
XRCC1P18887 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
XRCC1P18887 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
XRCC1P18887 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
XRCC1P18887 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
XRCC1P18887 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
XRCC1P18887 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
XRCC1P18887 MFSD8-220ENST00000641243 1422 ntBASIC4.15□□□□□ -1.74
XRCC1P18887 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
XRCC1P18887 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
XRCC1P18887 RN7SKP182-201ENST00000410772 298 ntBASIC4.15□□□□□ -1.75
XRCC1P18887 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.15□□□□□ -1.75
XRCC1P18887 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.15□□□□□ -1.75
XRCC1P18887 AL158073.1-201ENST00000426848 1104 ntBASIC4.15□□□□□ -1.75
XRCC1P18887 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.15□□□□□ -1.75
XRCC1P18887 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.15□□□□□ -1.75
XRCC1P18887 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.15□□□□□ -1.75
XRCC1P18887 AC092013.1-201ENST00000438795 332 ntBASIC4.15□□□□□ -1.75
XRCC1P18887 ELOCP10-201ENST00000440624 327 ntBASIC4.15□□□□□ -1.75
XRCC1P18887 MTCO3P43-201ENST00000440974 771 ntBASIC4.15□□□□□ -1.75
XRCC1P18887 MTND2P25-201ENST00000449028 610 ntBASIC4.15□□□□□ -1.75
XRCC1P18887 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.15□□□□□ -1.75
XRCC1P18887 HMGB1P5-202ENST00000451497 985 ntBASIC4.15□□□□□ -1.75
XRCC1P18887 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.15□□□□□ -1.75
XRCC1P18887 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
XRCC1P18887 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.15□□□□□ -1.75
XRCC1P18887 RPS27AP13-201ENST00000498403 237 ntBASIC4.15□□□□□ -1.75
XRCC1P18887 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.15□□□□□ -1.75
XRCC1P18887 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.15□□□□□ -1.75
XRCC1P18887 AC099522.1-202ENST00000514718 367 ntBASIC4.15□□□□□ -1.75
XRCC1P18887 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.15□□□□□ -1.75
XRCC1P18887 AC006064.5-201ENST00000541782 248 ntBASIC4.15□□□□□ -1.75
XRCC1P18887 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.15□□□□□ -1.75
XRCC1P18887 CKS1BP1-201ENST00000555221 240 ntBASIC4.15□□□□□ -1.75
XRCC1P18887 LINC00557-201ENST00000563184 1279 ntBASIC4.15□□□□□ -1.75
XRCC1P18887 ELOCP34-201ENST00000604436 327 ntBASIC4.15□□□□□ -1.75
XRCC1P18887 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.15□□□□□ -1.75
XRCC1P18887 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.15□□□□□ -1.75
XRCC1P18887 AC110792.4-201ENST00000609843 298 ntBASIC4.15□□□□□ -1.75
XRCC1P18887 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.15□□□□□ -1.75
XRCC1P18887 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.15□□□□□ -1.75
XRCC1P18887 AC116447.1-201ENST00000613153 453 ntBASIC4.15□□□□□ -1.75
XRCC1P18887 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.15□□□□□ -1.75
XRCC1P18887 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.15□□□□□ -1.75
XRCC1P18887 AC067852.7-201ENST00000623270 535 ntBASIC4.15□□□□□ -1.75
XRCC1P18887 AC068724.3-201ENST00000625906 87 ntBASIC4.15□□□□□ -1.75
XRCC1P18887 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.15□□□□□ -1.75
XRCC1P18887 HPVC1-201ENST00000629899 1198 ntBASIC4.15□□□□□ -1.75
XRCC1P18887 AC091948.2-201ENST00000636510 279 ntBASIC4.15□□□□□ -1.75
XRCC1P18887 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.15□□□□□ -1.75
XRCC1P18887 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.15□□□□□ -1.75
XRCC1P18887 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
XRCC1P18887 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
XRCC1P18887 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
XRCC1P18887 AC022893.2-201ENST00000564832 3296 ntBASIC4.15□□□□□ -1.75
XRCC1P18887 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.15□□□□□ -1.75
XRCC1P18887 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.15□□□□□ -1.75
XRCC1P18887 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
XRCC1P18887 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
XRCC1P18887 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.14□□□□□ -1.75
XRCC1P18887 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.14□□□□□ -1.75
XRCC1P18887 RBMY1KP-201ENST00000423480 476 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms