Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CD44P16070 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CD44P16070 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC8.26□□□□□ -1.09
CD44P16070 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CD44P16070 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
CD44P16070 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CD44P16070 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC8.26□□□□□ -1.09
CD44P16070 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CD44P16070 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CD44P16070 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC8.26□□□□□ -1.09
CD44P16070 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC8.26□□□□□ -1.09
CD44P16070 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CD44P16070 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CD44P16070 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC8.26□□□□□ -1.09
CD44P16070 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CD44P16070 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CD44P16070 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC8.26□□□□□ -1.09
CD44P16070 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC8.25□□□□□ -1.09
CD44P16070 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
CD44P16070 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC8.25□□□□□ -1.09
CD44P16070 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC8.25□□□□□ -1.09
CD44P16070 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CD44P16070 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
CD44P16070 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC8.25□□□□□ -1.09
CD44P16070 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
CD44P16070 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CD44P16070 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
CD44P16070 PPIAP22-201ENST00000358455 498 ntBASIC8.25□□□□□ -1.09
CD44P16070 RNU6-1064P-201ENST00000410626 104 ntBASIC8.25□□□□□ -1.09
CD44P16070 HMGN1P20-201ENST00000411849 300 ntBASIC8.25□□□□□ -1.09
CD44P16070 FTH1P10-202ENST00000430907 550 ntBASIC8.25□□□□□ -1.09
CD44P16070 DAP3P1-201ENST00000441522 278 ntBASIC8.25□□□□□ -1.09
CD44P16070 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC8.25□□□□□ -1.09
CD44P16070 RN7SL414P-201ENST00000469545 294 ntBASIC8.25□□□□□ -1.09
CD44P16070 AC008496.1-201ENST00000509131 295 ntBASIC8.25□□□□□ -1.09
CD44P16070 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC8.25□□□□□ -1.09
CD44P16070 AC115990.1-201ENST00000526957 301 ntBASIC8.25□□□□□ -1.09
CD44P16070 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC8.25□□□□□ -1.09
CD44P16070 AL355076.3-201ENST00000555838 587 ntBASIC8.25□□□□□ -1.09
CD44P16070 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC8.25□□□□□ -1.09
CD44P16070 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC8.25□□□□□ -1.09
CD44P16070 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC8.25□□□□□ -1.09
CD44P16070 AL589765.5-201ENST00000596133 515 ntBASIC8.25□□□□□ -1.09
CD44P16070 AC022239.4-201ENST00000602626 504 ntBASIC8.25□□□□□ -1.09
CD44P16070 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
CD44P16070 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC8.25□□□□□ -1.09
CD44P16070 MIR6872-201ENST00000612981 62 ntBASIC8.25□□□□□ -1.09
CD44P16070 Y_RNA.778-201ENST00000620203 90 ntBASIC8.25□□□□□ -1.09
CD44P16070 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC8.25□□□□□ -1.09
CD44P16070 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC8.25□□□□□ -1.09
CD44P16070 OR52K3P-202ENST00000641797 1729 ntBASIC8.25□□□□□ -1.09
CD44P16070 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CD44P16070 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CD44P16070 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC8.25□□□□□ -1.09
CD44P16070 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC8.25□□□□□ -1.09
CD44P16070 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CD44P16070 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CD44P16070 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC8.25□□□□□ -1.09
CD44P16070 SPATA31C2-201ENST00000324915 3777 ntBASIC8.24□□□□□ -1.09
CD44P16070 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CD44P16070 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CD44P16070 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC8.24□□□□□ -1.09
CD44P16070 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CD44P16070 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CD44P16070 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
CD44P16070 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CD44P16070 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CD44P16070 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
CD44P16070 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CD44P16070 MAPK10-233ENST00000515650 2394 ntTSL 5 BASIC8.24□□□□□ -1.09
CD44P16070 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CD44P16070 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
CD44P16070 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC8.24□□□□□ -1.09
CD44P16070 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC8.24□□□□□ -1.09
CD44P16070 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC8.24□□□□□ -1.09
CD44P16070 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC8.24□□□□□ -1.09
CD44P16070 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC8.24□□□□□ -1.09
CD44P16070 EIF4A1P5-201ENST00000428062 1095 ntBASIC8.24□□□□□ -1.09
CD44P16070 OR7E62P-201ENST00000456741 477 ntBASIC8.24□□□□□ -1.09
CD44P16070 AP000893.1-201ENST00000474462 794 ntBASIC8.24□□□□□ -1.09
CD44P16070 RBBP4P6-201ENST00000508098 202 ntBASIC8.24□□□□□ -1.09
CD44P16070 RN7SKP283-201ENST00000517197 270 ntBASIC8.24□□□□□ -1.09
CD44P16070 IGKV2-29-201ENST00000521304 372 ntBASIC8.24□□□□□ -1.09
CD44P16070 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC8.24□□□□□ -1.09
CD44P16070 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC8.24□□□□□ -1.09
CD44P16070 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC8.24□□□□□ -1.09
CD44P16070 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC8.24□□□□□ -1.09
CD44P16070 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC8.24□□□□□ -1.09
CD44P16070 AC091180.5-201ENST00000576461 382 ntTSL 5 BASIC8.24□□□□□ -1.09
CD44P16070 CENPF-206ENST00000614578 528 ntTSL 5 BASIC8.24□□□□□ -1.09
CD44P16070 SNHG22-203ENST00000617833 660 ntBASIC8.24□□□□□ -1.09
CD44P16070 PFN1P2-202ENST00000621347 397 ntBASIC8.24□□□□□ -1.09
CD44P16070 U6.92-201ENST00000636464 89 ntBASIC8.24□□□□□ -1.09
CD44P16070 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CD44P16070 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC8.24□□□□□ -1.09
CD44P16070 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC8.24□□□□□ -1.09
CD44P16070 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CD44P16070 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
CD44P16070 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
CD44P16070 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms