Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
ZIC3O60481 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ZIC3O60481 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.33□□□□□ -1.72
ZIC3O60481 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
ZIC3O60481 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ZIC3O60481 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZIC3O60481 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
ZIC3O60481 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.32□□□□□ -1.72
ZIC3O60481 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZIC3O60481 RNU6-839P-201ENST00000363347 108 ntBASIC4.32□□□□□ -1.72
ZIC3O60481 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.32□□□□□ -1.72
ZIC3O60481 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ZIC3O60481 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.32□□□□□ -1.72
ZIC3O60481 AL356131.1-201ENST00000405826 414 ntBASIC4.32□□□□□ -1.72
ZIC3O60481 RNU2-65P-201ENST00000410162 185 ntBASIC4.32□□□□□ -1.72
ZIC3O60481 RNA5SP296-201ENST00000410523 111 ntBASIC4.32□□□□□ -1.72
ZIC3O60481 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.32□□□□□ -1.72
ZIC3O60481 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.32□□□□□ -1.72
ZIC3O60481 TMBIM7P-201ENST00000418074 855 ntBASIC4.32□□□□□ -1.72
ZIC3O60481 RGS17P1-201ENST00000423358 553 ntBASIC4.32□□□□□ -1.72
ZIC3O60481 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.32□□□□□ -1.72
ZIC3O60481 AC104978.1-201ENST00000449387 391 ntBASIC4.32□□□□□ -1.72
ZIC3O60481 RPL37P3-201ENST00000456825 293 ntBASIC4.32□□□□□ -1.72
ZIC3O60481 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.32□□□□□ -1.72
ZIC3O60481 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.32□□□□□ -1.72
ZIC3O60481 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.32□□□□□ -1.72
ZIC3O60481 RPS23P1-201ENST00000491662 432 ntBASIC4.32□□□□□ -1.72
ZIC3O60481 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.32□□□□□ -1.72
ZIC3O60481 MTCYBP16-201ENST00000509187 1129 ntBASIC4.32□□□□□ -1.72
ZIC3O60481 AC010486.3-201ENST00000511602 785 ntBASIC4.32□□□□□ -1.72
ZIC3O60481 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.32□□□□□ -1.72
ZIC3O60481 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.32□□□□□ -1.72
ZIC3O60481 RNU1-6P-201ENST00000516290 144 ntBASIC4.32□□□□□ -1.72
ZIC3O60481 Y_RNA.688-201ENST00000516565 95 ntBASIC4.32□□□□□ -1.72
ZIC3O60481 FTH1P11-201ENST00000517577 551 ntBASIC4.32□□□□□ -1.72
ZIC3O60481 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.32□□□□□ -1.72
ZIC3O60481 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.32□□□□□ -1.72
ZIC3O60481 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.32□□□□□ -1.72
ZIC3O60481 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.32□□□□□ -1.72
ZIC3O60481 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.32□□□□□ -1.72
ZIC3O60481 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.32□□□□□ -1.72
ZIC3O60481 DUXAP1-201ENST00000556632 463 ntBASIC4.32□□□□□ -1.72
ZIC3O60481 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.32□□□□□ -1.72
ZIC3O60481 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.32□□□□□ -1.72
ZIC3O60481 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.32□□□□□ -1.72
ZIC3O60481 AC010200.2-201ENST00000605098 235 ntBASIC4.32□□□□□ -1.72
ZIC3O60481 AL133507.1-201ENST00000605269 557 ntBASIC4.32□□□□□ -1.72
ZIC3O60481 AC012414.7-202ENST00000622705 1090 ntBASIC4.32□□□□□ -1.72
ZIC3O60481 AC026422.1-201ENST00000623961 452 ntBASIC4.32□□□□□ -1.72
ZIC3O60481 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.32□□□□□ -1.72
ZIC3O60481 MIR4278-201ENST00000636094 69 ntBASIC4.32□□□□□ -1.72
ZIC3O60481 AF001550.2-201ENST00000636643 217 ntBASIC4.32□□□□□ -1.72
ZIC3O60481 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
ZIC3O60481 CASC19-204ENST00000641001 2055 ntBASIC4.32□□□□□ -1.72
ZIC3O60481 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
ZIC3O60481 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZIC3O60481 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.32□□□□□ -1.72
ZIC3O60481 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZIC3O60481 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.32□□□□□ -1.72
ZIC3O60481 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.32□□□□□ -1.72
ZIC3O60481 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZIC3O60481 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ZIC3O60481 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ZIC3O60481 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.31□□□□□ -1.72
ZIC3O60481 AC012618.3-205ENST00000637896 1496 ntBASIC4.31□□□□□ -1.72
ZIC3O60481 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
ZIC3O60481 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ZIC3O60481 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZIC3O60481 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.31□□□□□ -1.72
ZIC3O60481 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZIC3O60481 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.31□□□□□ -1.72
ZIC3O60481 RNA5SP80-201ENST00000410475 111 ntBASIC4.31□□□□□ -1.72
ZIC3O60481 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.31□□□□□ -1.72
ZIC3O60481 AC234782.4-201ENST00000417646 1048 ntBASIC4.31□□□□□ -1.72
ZIC3O60481 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.31□□□□□ -1.72
ZIC3O60481 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.31□□□□□ -1.72
ZIC3O60481 SEPT7P5-201ENST00000434048 306 ntBASIC4.31□□□□□ -1.72
ZIC3O60481 ACTR3P2-201ENST00000439585 1257 ntBASIC4.31□□□□□ -1.72
ZIC3O60481 AC093155.1-201ENST00000440164 826 ntBASIC4.31□□□□□ -1.72
ZIC3O60481 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.31□□□□□ -1.72
ZIC3O60481 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.31□□□□□ -1.72
ZIC3O60481 RPL21P134-201ENST00000453468 483 ntBASIC4.31□□□□□ -1.72
ZIC3O60481 RFC5P1-201ENST00000454419 874 ntBASIC4.31□□□□□ -1.72
ZIC3O60481 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.31□□□□□ -1.72
ZIC3O60481 AL133477.1-201ENST00000457472 514 ntBASIC4.31□□□□□ -1.72
ZIC3O60481 RPL5P24-201ENST00000463742 885 ntBASIC4.31□□□□□ -1.72
ZIC3O60481 AC108734.3-201ENST00000481241 1165 ntBASIC4.31□□□□□ -1.72
ZIC3O60481 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.31□□□□□ -1.72
ZIC3O60481 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ZIC3O60481 AC008885.2-201ENST00000509506 930 ntBASIC4.31□□□□□ -1.72
ZIC3O60481 AC116353.3-201ENST00000511215 249 ntBASIC4.31□□□□□ -1.72
ZIC3O60481 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.31□□□□□ -1.72
ZIC3O60481 TCP11X3P-202ENST00000514289 1254 ntBASIC4.31□□□□□ -1.72
ZIC3O60481 RNA5SP249-201ENST00000516127 99 ntBASIC4.31□□□□□ -1.72
ZIC3O60481 RNA5SP135-201ENST00000517019 125 ntBASIC4.31□□□□□ -1.72
ZIC3O60481 CDH12P4-201ENST00000517835 295 ntBASIC4.31□□□□□ -1.72
ZIC3O60481 CDH12P3-201ENST00000517935 295 ntBASIC4.31□□□□□ -1.72
ZIC3O60481 CDH12P1-201ENST00000518435 295 ntBASIC4.31□□□□□ -1.72
ZIC3O60481 AC087808.1-201ENST00000520501 361 ntBASIC4.31□□□□□ -1.72
ZIC3O60481 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms