Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RNA5SP135-201ENST00000517019 125 ntBASIC5.22□□□□□ -1.57
FOXN3O00409 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.22□□□□□ -1.57
FOXN3O00409 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.22□□□□□ -1.57
FOXN3O00409 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.22□□□□□ -1.57
FOXN3O00409 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.22□□□□□ -1.57
FOXN3O00409 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.22□□□□□ -1.57
FOXN3O00409 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC5.22□□□□□ -1.57
FOXN3O00409 AC091515.1-201ENST00000548110 679 ntBASIC5.22□□□□□ -1.57
FOXN3O00409 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.22□□□□□ -1.57
FOXN3O00409 NBEAP1-201ENST00000554452 979 ntBASIC5.22□□□□□ -1.57
FOXN3O00409 HIGD1AP17-201ENST00000554576 276 ntBASIC5.22□□□□□ -1.57
FOXN3O00409 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.22□□□□□ -1.57
FOXN3O00409 AC087477.6-201ENST00000559595 843 ntBASIC5.22□□□□□ -1.57
FOXN3O00409 HMGB3P26-201ENST00000560051 582 ntBASIC5.22□□□□□ -1.57
FOXN3O00409 SNORA74C-1-201ENST00000580726 201 ntBASIC5.22□□□□□ -1.57
FOXN3O00409 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.22□□□□□ -1.57
FOXN3O00409 DUXAP3-201ENST00000603616 594 ntBASIC5.22□□□□□ -1.57
FOXN3O00409 AL158042.1-201ENST00000605338 460 ntBASIC5.22□□□□□ -1.57
FOXN3O00409 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.22□□□□□ -1.57
FOXN3O00409 BX323046.1-201ENST00000610145 535 ntBASIC5.22□□□□□ -1.57
FOXN3O00409 AC100847.1-201ENST00000611316 481 ntBASIC5.22□□□□□ -1.57
FOXN3O00409 AL121612.2-201ENST00000612261 482 ntBASIC5.22□□□□□ -1.57
FOXN3O00409 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.22□□□□□ -1.57
FOXN3O00409 AC121761.2-201ENST00000617300 689 ntBASIC5.22□□□□□ -1.57
FOXN3O00409 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.22□□□□□ -1.57
FOXN3O00409 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
FOXN3O00409 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
FOXN3O00409 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.22□□□□□ -1.57
FOXN3O00409 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
FOXN3O00409 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
FOXN3O00409 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
FOXN3O00409 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
FOXN3O00409 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
FOXN3O00409 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.21□□□□□ -1.57
FOXN3O00409 AC091046.3-201ENST00000631455 1574 ntBASIC5.21□□□□□ -1.57
FOXN3O00409 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
FOXN3O00409 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
FOXN3O00409 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
FOXN3O00409 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.21□□□□□ -1.58
FOXN3O00409 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
FOXN3O00409 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
FOXN3O00409 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.21□□□□□ -1.58
FOXN3O00409 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
FOXN3O00409 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.21□□□□□ -1.58
FOXN3O00409 MIR217-201ENST00000384817 110 ntBASIC5.21□□□□□ -1.58
FOXN3O00409 AL049545.1-201ENST00000401856 572 ntBASIC5.21□□□□□ -1.58
FOXN3O00409 AL136133.1-201ENST00000413694 376 ntBASIC5.21□□□□□ -1.58
FOXN3O00409 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.21□□□□□ -1.58
FOXN3O00409 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.21□□□□□ -1.58
FOXN3O00409 RPL7P53-201ENST00000421245 739 ntBASIC5.21□□□□□ -1.58
FOXN3O00409 Z93242.1-201ENST00000427102 353 ntBASIC5.21□□□□□ -1.58
FOXN3O00409 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.21□□□□□ -1.58
FOXN3O00409 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.21□□□□□ -1.58
FOXN3O00409 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.21□□□□□ -1.58
FOXN3O00409 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.21□□□□□ -1.58
FOXN3O00409 AC104978.1-201ENST00000449387 391 ntBASIC5.21□□□□□ -1.58
FOXN3O00409 Z99714.1-201ENST00000450463 807 ntBASIC5.21□□□□□ -1.58
FOXN3O00409 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.21□□□□□ -1.58
FOXN3O00409 RPS15AP1-201ENST00000457423 391 ntBASIC5.21□□□□□ -1.58
FOXN3O00409 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.21□□□□□ -1.58
FOXN3O00409 AC104689.1-201ENST00000473356 768 ntBASIC5.21□□□□□ -1.58
FOXN3O00409 AC069304.1-201ENST00000491593 704 ntBASIC5.21□□□□□ -1.58
FOXN3O00409 RN7SL558P-201ENST00000497468 299 ntBASIC5.21□□□□□ -1.58
FOXN3O00409 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.21□□□□□ -1.58
FOXN3O00409 SCARNA21.2-201ENST00000516600 166 ntBASIC5.21□□□□□ -1.58
FOXN3O00409 RN7SKP96-201ENST00000516948 297 ntBASIC5.21□□□□□ -1.58
FOXN3O00409 RNU6-709P-201ENST00000517257 104 ntBASIC5.21□□□□□ -1.58
FOXN3O00409 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.21□□□□□ -1.58
FOXN3O00409 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.21□□□□□ -1.58
FOXN3O00409 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.21□□□□□ -1.58
FOXN3O00409 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
FOXN3O00409 AC090515.3-201ENST00000560431 315 ntBASIC5.21□□□□□ -1.58
FOXN3O00409 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.21□□□□□ -1.58
FOXN3O00409 AL390726.5-202ENST00000564800 256 ntBASIC5.21□□□□□ -1.58
FOXN3O00409 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.21□□□□□ -1.58
FOXN3O00409 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.21□□□□□ -1.58
FOXN3O00409 AC017100.2-201ENST00000584628 355 ntBASIC5.21□□□□□ -1.58
FOXN3O00409 BNIP3P24-201ENST00000593398 557 ntBASIC5.21□□□□□ -1.58
FOXN3O00409 BNIP3P26-201ENST00000600827 554 ntBASIC5.21□□□□□ -1.58
FOXN3O00409 AL451074.6-201ENST00000608512 729 ntBASIC5.21□□□□□ -1.58
FOXN3O00409 AP001521.2-201ENST00000608772 546 ntBASIC5.21□□□□□ -1.58
FOXN3O00409 AC131235.4-201ENST00000609288 620 ntBASIC5.21□□□□□ -1.58
FOXN3O00409 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.21□□□□□ -1.58
FOXN3O00409 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.21□□□□□ -1.58
FOXN3O00409 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
FOXN3O00409 AC131159.1-201ENST00000621854 213 ntBASIC5.21□□□□□ -1.58
FOXN3O00409 AP002799.1-201ENST00000623552 423 ntBASIC5.21□□□□□ -1.58
FOXN3O00409 AL353662.3-201ENST00000625131 237 ntBASIC5.21□□□□□ -1.58
FOXN3O00409 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.21□□□□□ -1.58
FOXN3O00409 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.21□□□□□ -1.58
FOXN3O00409 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
FOXN3O00409 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
FOXN3O00409 AC104454.1-201ENST00000421341 1401 ntBASIC5.21□□□□□ -1.58
FOXN3O00409 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
FOXN3O00409 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
FOXN3O00409 HSPA8P18-201ENST00000439846 1928 ntBASIC5.21□□□□□ -1.58
FOXN3O00409 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
FOXN3O00409 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.21□□□□□ -1.58
FOXN3O00409 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FOXN3O00409 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms