Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL121576.1-201ENST00000556055 276 ntBASIC3.69□□□□□ -1.82
UPK1AO00322 AL049874.4-201ENST00000557593 255 ntBASIC3.69□□□□□ -1.82
UPK1AO00322 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.69□□□□□ -1.82
UPK1AO00322 AC099489.2-201ENST00000574976 260 ntBASIC3.69□□□□□ -1.82
UPK1AO00322 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
UPK1AO00322 AC020910.2-201ENST00000603635 610 ntBASIC3.69□□□□□ -1.82
UPK1AO00322 AC091167.4-201ENST00000605079 184 ntBASIC3.69□□□□□ -1.82
UPK1AO00322 AC007620.3-201ENST00000608131 497 ntBASIC3.69□□□□□ -1.82
UPK1AO00322 AC023043.4-201ENST00000612081 449 ntBASIC3.69□□□□□ -1.82
UPK1AO00322 AC004825.2-201ENST00000616634 455 ntBASIC3.69□□□□□ -1.82
UPK1AO00322 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.69□□□□□ -1.82
UPK1AO00322 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
UPK1AO00322 AC110792.3-201ENST00000595906 1614 ntBASIC3.69□□□□□ -1.82
UPK1AO00322 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
UPK1AO00322 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.69□□□□□ -1.82
UPK1AO00322 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
UPK1AO00322 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
UPK1AO00322 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
UPK1AO00322 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
UPK1AO00322 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
UPK1AO00322 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.68□□□□□ -1.82
UPK1AO00322 OR6K4P-201ENST00000423179 955 ntBASIC3.68□□□□□ -1.82
UPK1AO00322 AL691449.1-201ENST00000426570 421 ntBASIC3.68□□□□□ -1.82
UPK1AO00322 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.68□□□□□ -1.82
UPK1AO00322 NDUFS5P3-201ENST00000450668 321 ntBASIC3.68□□□□□ -1.82
UPK1AO00322 AL354710.1-201ENST00000453641 246 ntBASIC3.68□□□□□ -1.82
UPK1AO00322 MTCO3P16-201ENST00000454456 754 ntBASIC3.68□□□□□ -1.82
UPK1AO00322 C1DP3-201ENST00000455013 423 ntBASIC3.68□□□□□ -1.82
UPK1AO00322 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.68□□□□□ -1.82
UPK1AO00322 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.68□□□□□ -1.82
UPK1AO00322 RNA5SP179-201ENST00000517284 121 ntBASIC3.68□□□□□ -1.82
UPK1AO00322 AC087369.1-201ENST00000520775 996 ntBASIC3.68□□□□□ -1.82
UPK1AO00322 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.68□□□□□ -1.82
UPK1AO00322 AC092747.2-201ENST00000545069 983 ntBASIC3.68□□□□□ -1.82
UPK1AO00322 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.68□□□□□ -1.82
UPK1AO00322 AC087888.1-201ENST00000550884 1254 ntBASIC3.68□□□□□ -1.82
UPK1AO00322 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.68□□□□□ -1.82
UPK1AO00322 AC090877.1-201ENST00000561418 344 ntBASIC3.68□□□□□ -1.82
UPK1AO00322 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.68□□□□□ -1.82
UPK1AO00322 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.68□□□□□ -1.82
UPK1AO00322 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.68□□□□□ -1.82
UPK1AO00322 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.68□□□□□ -1.82
UPK1AO00322 BRDTP1-201ENST00000605735 677 ntBASIC3.68□□□□□ -1.82
UPK1AO00322 AC117490.2-201ENST00000610042 594 ntBASIC3.68□□□□□ -1.82
UPK1AO00322 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
UPK1AO00322 RMST_5.1-201ENST00000618704 126 ntBASIC3.68□□□□□ -1.82
UPK1AO00322 AL139089.1-201ENST00000620372 975 ntBASIC3.68□□□□□ -1.82
UPK1AO00322 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.68□□□□□ -1.82
UPK1AO00322 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
UPK1AO00322 MAPK10-372ENST00000641954 3413 ntBASIC3.68□□□□□ -1.82
UPK1AO00322 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
UPK1AO00322 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.68□□□□□ -1.82
UPK1AO00322 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
UPK1AO00322 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
UPK1AO00322 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.68□□□□□ -1.82
UPK1AO00322 AP002001.2-201ENST00000529025 1469 ntBASIC3.67□□□□□ -1.82
UPK1AO00322 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.67□□□□□ -1.82
UPK1AO00322 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.67□□□□□ -1.82
UPK1AO00322 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
UPK1AO00322 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
UPK1AO00322 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
UPK1AO00322 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
UPK1AO00322 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
UPK1AO00322 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.67□□□□□ -1.82
UPK1AO00322 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
UPK1AO00322 AL034403.1-201ENST00000399414 885 ntBASIC3.67□□□□□ -1.82
UPK1AO00322 HLFP1-201ENST00000402375 499 ntBASIC3.67□□□□□ -1.82
UPK1AO00322 RPL21P65-201ENST00000406094 466 ntBASIC3.67□□□□□ -1.82
UPK1AO00322 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.67□□□□□ -1.82
UPK1AO00322 COX6CP17-201ENST00000421389 185 ntBASIC3.67□□□□□ -1.82
UPK1AO00322 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.67□□□□□ -1.82
UPK1AO00322 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.67□□□□□ -1.82
UPK1AO00322 LARP7P4-201ENST00000481075 878 ntBASIC3.67□□□□□ -1.82
UPK1AO00322 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.67□□□□□ -1.82
UPK1AO00322 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.67□□□□□ -1.82
UPK1AO00322 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.67□□□□□ -1.82
UPK1AO00322 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.67□□□□□ -1.82
UPK1AO00322 HIGD1AP5-201ENST00000529959 259 ntBASIC3.67□□□□□ -1.82
UPK1AO00322 FAM60CP-201ENST00000591086 664 ntBASIC3.67□□□□□ -1.82
UPK1AO00322 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.67□□□□□ -1.82
UPK1AO00322 AL590410.1-201ENST00000617925 333 ntBASIC3.67□□□□□ -1.82
UPK1AO00322 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
UPK1AO00322 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
UPK1AO00322 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
UPK1AO00322 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
UPK1AO00322 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
UPK1AO00322 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
UPK1AO00322 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
UPK1AO00322 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.66□□□□□ -1.82
UPK1AO00322 HSPE1P8-201ENST00000406997 288 ntBASIC3.66□□□□□ -1.82
UPK1AO00322 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.66□□□□□ -1.82
UPK1AO00322 AL450992.3-201ENST00000413192 568 ntBASIC3.66□□□□□ -1.82
UPK1AO00322 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.66□□□□□ -1.82
UPK1AO00322 AC002075.2-201ENST00000425207 252 ntBASIC3.66□□□□□ -1.82
UPK1AO00322 RSL24D1P6-201ENST00000426934 401 ntBASIC3.66□□□□□ -1.82
UPK1AO00322 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.66□□□□□ -1.82
UPK1AO00322 AL392003.1-201ENST00000434394 243 ntBASIC3.66□□□□□ -1.82
UPK1AO00322 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.66□□□□□ -1.82
UPK1AO00322 RANP8-201ENST00000444720 713 ntBASIC3.66□□□□□ -1.82
UPK1AO00322 AC114755.5-201ENST00000447760 831 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms