Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
CHKB-CPT1BH3BT56 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
CHKB-CPT1BH3BT56 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CHKB-CPT1BH3BT56 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.08
CHKB-CPT1BH3BT56 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
CHKB-CPT1BH3BT56 AC008264.2-201ENST00000610193 3731 ntBASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 CYP4Z2P-201ENST00000423332 1512 ntBASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 SNORA51.4-201ENST00000364993 124 ntBASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 MIR153-1-201ENST00000384914 90 ntBASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 MIR607-201ENST00000385241 96 ntBASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 RNA5SP344-201ENST00000411081 104 ntBASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 TRGV6-201ENST00000417928 299 ntBASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 AC066692.1-201ENST00000421721 457 ntBASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 OR5BE1P-201ENST00000425977 939 ntBASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 OR5AW1P-201ENST00000426334 1006 ntBASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 SETP8-201ENST00000435341 628 ntBASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 RPL23AP22-201ENST00000437556 453 ntBASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 RPL12P49-201ENST00000441100 121 ntBASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 RPL36AP39-201ENST00000445859 318 ntBASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 AC108463.1-201ENST00000450258 347 ntBASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 AC093392.2-201ENST00000450682 337 ntBASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 OR2AO1P-201ENST00000476497 403 ntBASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 RN7SL826P-201ENST00000479724 288 ntBASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 RN7SKP82-201ENST00000516786 223 ntBASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 AC007536.1-201ENST00000533382 349 ntBASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 AL157394.1-201ENST00000562983 1224 ntBASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 MIR4691-201ENST00000583764 85 ntBASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 YWHAQP7-201ENST00000603536 658 ntBASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 AC019193.2-201ENST00000610012 634 ntBASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 AC124312.6-202ENST00000623624 418 ntBASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 OR5BE1P-202ENST00000641168 1176 ntBASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 OR13C1P-202ENST00000641378 2919 ntBASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CHKB-CPT1BH3BT56 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 RNU1-132P-201ENST00000364300 164 ntBASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 MIR3065-201ENST00000390137 79 ntBASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 AC097374.1-203ENST00000400783 485 ntBASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 RN7SKP53-201ENST00000411337 315 ntBASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 HMGB3P23-201ENST00000414981 585 ntBASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 SLC9B1P4-201ENST00000421957 1288 ntBASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 AP000907.1-201ENST00000428428 510 ntBASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 MRPS18BP2-201ENST00000434310 759 ntBASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 AL022324.2-201ENST00000434827 780 ntBASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 HMGB1P45-201ENST00000435986 653 ntBASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 RPL7P11-201ENST00000437586 658 ntBASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 AC112498.1-201ENST00000444401 332 ntBASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 GAPDHP27-201ENST00000447427 1020 ntBASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 CEACAMP6-201ENST00000452007 574 ntBASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 MTND4LP2-201ENST00000502312 285 ntBASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC2.07□□□□□ -2.08
CHKB-CPT1BH3BT56 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms