Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AP001804.3-201ENST00000525146 880 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 OR5B10P-201ENST00000532869 642 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 MT1CP-201ENST00000567054 174 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 OR4K8P-201ENST00000578842 1048 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 RN7SL230P-201ENST00000580835 303 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 AC245052.7-201ENST00000601161 359 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 AC139493.1-201ENST00000604368 397 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 AC007938.3-201ENST00000604965 623 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 AC091768.1-201ENST00000609258 930 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 MIR6778-201ENST00000617912 73 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 MIR6823-201ENST00000622118 61 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 MIR6806-201ENST00000622141 64 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 AC005514.1-201ENST00000623521 208 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 AL589993.1-201ENST00000407450 2524 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 AC119674.1-204ENST00000641348 1343 ntBASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 RNA5SP65-201ENST00000363166 119 ntBASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 SNORA64.3-201ENST00000365647 134 ntBASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 MIR548F4-201ENST00000408515 105 ntBASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 RNU6-370P-201ENST00000411008 104 ntBASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 RNU6-1304P-201ENST00000411374 106 ntBASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 AL354890.1-201ENST00000413730 346 ntBASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 AC048351.1-201ENST00000420064 602 ntBASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 YWHAZP8-201ENST00000436935 731 ntBASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 PRPF38AP2-201ENST00000438179 851 ntBASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 AC093156.1-201ENST00000440382 670 ntBASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 HMGB3P22-202ENST00000451823 572 ntBASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 RNU7-66P-201ENST00000459469 62 ntBASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 AC083904.1-201ENST00000487828 231 ntBASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 AC055855.1-201ENST00000489563 579 ntBASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 AC027026.1-201ENST00000532323 742 ntBASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 RN7SL199P-201ENST00000578752 281 ntBASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 MIR5095-201ENST00000578844 88 ntBASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 RN7SL656P-201ENST00000579044 281 ntBASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 RN7SL404P-201ENST00000582421 281 ntBASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 uc_338.12-201ENST00000616344 181 ntBASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 RMST_9.1-201ENST00000619945 193 ntBASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 ATM-230ENST00000640388 578 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 OR52B5P-204ENST00000641744 3467 ntBASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 AC083806.2-201ENST00000617795 2685 ntBASIC6.59□□□□□ -1.35
PCDHB11Q9Y5F2 MTND4P1-201ENST00000457501 1466 ntBASIC6.59□□□□□ -1.36
PCDHB11Q9Y5F2 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
PCDHB11Q9Y5F2 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.36
PCDHB11Q9Y5F2 AC107081.3-201ENST00000612715 2034 ntBASIC6.59□□□□□ -1.36
PCDHB11Q9Y5F2 AC020658.2-201ENST00000559030 4020 ntBASIC6.59□□□□□ -1.36
PCDHB11Q9Y5F2 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms