Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 RPS7P5-201ENST00000441482 581 ntBASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 RN7SL354P-201ENST00000469282 294 ntBASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 PPIAP15-201ENST00000479662 484 ntBASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 AC083982.1-201ENST00000485679 344 ntBASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 AC023141.12-201ENST00000512399 199 ntBASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 AC026726.1-201ENST00000512859 601 ntBASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 RNA5SP49-201ENST00000516450 115 ntBASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 RNA5SP519-201ENST00000516480 119 ntBASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 NARSP2-201ENST00000518524 679 ntBASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 AC105233.3-201ENST00000531125 744 ntBASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 AC008083.2-201ENST00000546707 476 ntBASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 AC044860.2-201ENST00000561005 179 ntBASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 ZNF192P1-203ENST00000565888 810 ntBASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 AP003117.1-201ENST00000602771 554 ntBASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 AC090948.1-201ENST00000607464 549 ntBASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 MIR6780A-201ENST00000615089 68 ntBASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 SNORA11.6-201ENST00000619030 128 ntBASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 AC018445.2-201ENST00000622987 260 ntBASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 AP001148.1-201ENST00000624124 2359 ntBASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 AL158163.1-201ENST00000603915 1649 ntBASIC3.3□□□□□ -1.88
CTNNBIP1Q9NSA3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 NMD3P1-201ENST00000439704 1488 ntBASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 MTND4P10-201ENST00000446199 1363 ntBASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 RNU6-666P-201ENST00000363499 107 ntBASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 MIR105-2-201ENST00000385083 81 ntBASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 PTMAP5-201ENST00000393073 333 ntBASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 AL035696.2-201ENST00000407941 709 ntBASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 AC115285.1-201ENST00000424879 736 ntBASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 RPEP3-201ENST00000425462 676 ntBASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 RNU7-170P-201ENST00000459303 61 ntBASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 RPL7P1-201ENST00000468161 747 ntBASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 RPL7P9-201ENST00000468715 747 ntBASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 AF213884.1-201ENST00000488102 463 ntBASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 RPL30P11-201ENST00000495304 339 ntBASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 FTH1P24-201ENST00000503502 462 ntBASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 AC093824.1-201ENST00000508796 343 ntBASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 RNA5SP143-201ENST00000516936 115 ntBASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 PTP4A1P6-201ENST00000531034 478 ntBASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 MTND5P21-201ENST00000531961 522 ntBASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 AC022655.2-201ENST00000577280 318 ntBASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 OR7E18P-201ENST00000592589 702 ntBASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 EIF1P6-201ENST00000600054 334 ntBASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 AC068790.7-201ENST00000602347 528 ntBASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 AL391261.4-201ENST00000616012 481 ntBASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 AC006065.5-201ENST00000623427 349 ntBASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 U6.98-201ENST00000637157 84 ntBASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 OTUD4P1-201ENST00000237841 3067 ntBASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTNNBIP1Q9NSA3 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CTNNBIP1Q9NSA3 AL353746.1-201ENST00000566293 6881 ntBASIC3.28□□□□□ -1.88
CTNNBIP1Q9NSA3 UBE3AP2-201ENST00000429033 2259 ntBASIC3.28□□□□□ -1.88
CTNNBIP1Q9NSA3 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.28□□□□□ -1.88
CTNNBIP1Q9NSA3 NCAPGP1-201ENST00000505112 1814 ntBASIC3.28□□□□□ -1.88
CTNNBIP1Q9NSA3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CTNNBIP1Q9NSA3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CTNNBIP1Q9NSA3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CTNNBIP1Q9NSA3 SNORA60-201ENST00000362396 134 ntBASIC3.28□□□□□ -1.88
CTNNBIP1Q9NSA3 U1.1-201ENST00000384101 164 ntBASIC3.28□□□□□ -1.88
CTNNBIP1Q9NSA3 MIR153-1-201ENST00000384914 90 ntBASIC3.28□□□□□ -1.88
CTNNBIP1Q9NSA3 RN7SKP182-201ENST00000410772 298 ntBASIC3.28□□□□□ -1.88
CTNNBIP1Q9NSA3 NRBF2P2-201ENST00000413087 861 ntBASIC3.28□□□□□ -1.88
CTNNBIP1Q9NSA3 AC004022.2-201ENST00000413824 193 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms