Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.7□□□□□ -1.5
VTA1Q9NP79 HIGD1AP17-201ENST00000554576 276 ntBASIC5.7□□□□□ -1.5
VTA1Q9NP79 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.7□□□□□ -1.5
VTA1Q9NP79 AC079075.1-201ENST00000559543 878 ntBASIC5.7□□□□□ -1.5
VTA1Q9NP79 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.7□□□□□ -1.5
VTA1Q9NP79 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.7□□□□□ -1.5
VTA1Q9NP79 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.7□□□□□ -1.5
VTA1Q9NP79 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.7□□□□□ -1.5
VTA1Q9NP79 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.7□□□□□ -1.5
VTA1Q9NP79 AL590229.1-201ENST00000603497 542 ntBASIC5.7□□□□□ -1.5
VTA1Q9NP79 AL390816.3-201ENST00000604527 1066 ntBASIC5.7□□□□□ -1.5
VTA1Q9NP79 AL163642.2-201ENST00000604722 1019 ntBASIC5.7□□□□□ -1.5
VTA1Q9NP79 AL391358.1-201ENST00000605342 190 ntBASIC5.7□□□□□ -1.5
VTA1Q9NP79 MIR6780A-201ENST00000615089 68 ntBASIC5.7□□□□□ -1.5
VTA1Q9NP79 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.7□□□□□ -1.5
VTA1Q9NP79 AC073530.2-201ENST00000623987 261 ntBASIC5.7□□□□□ -1.5
VTA1Q9NP79 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VTA1Q9NP79 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.7□□□□□ -1.5
VTA1Q9NP79 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.7□□□□□ -1.5
VTA1Q9NP79 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.7□□□□□ -1.5
VTA1Q9NP79 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
VTA1Q9NP79 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
VTA1Q9NP79 ZNF542P-204ENST00000482727 1305 ntBASIC5.7□□□□□ -1.5
VTA1Q9NP79 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VTA1Q9NP79 AC009313.2-201ENST00000417893 1941 ntBASIC5.7□□□□□ -1.5
VTA1Q9NP79 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VTA1Q9NP79 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VTA1Q9NP79 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
VTA1Q9NP79 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VTA1Q9NP79 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
VTA1Q9NP79 AC011447.7-201ENST00000624228 1590 ntBASIC5.69□□□□□ -1.5
VTA1Q9NP79 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VTA1Q9NP79 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
VTA1Q9NP79 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VTA1Q9NP79 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 RNU6-553P-201ENST00000364047 96 ntBASIC5.69□□□□□ -1.5
VTA1Q9NP79 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 SNORA77-201ENST00000408716 125 ntBASIC5.69□□□□□ -1.5
VTA1Q9NP79 RNU2-50P-201ENST00000410494 143 ntBASIC5.69□□□□□ -1.5
VTA1Q9NP79 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 AF186996.5-201ENST00000418098 904 ntBASIC5.69□□□□□ -1.5
VTA1Q9NP79 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.69□□□□□ -1.5
VTA1Q9NP79 AC118469.1-201ENST00000442943 488 ntBASIC5.69□□□□□ -1.5
VTA1Q9NP79 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.69□□□□□ -1.5
VTA1Q9NP79 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 MTND2P4-201ENST00000445034 1004 ntBASIC5.69□□□□□ -1.5
VTA1Q9NP79 AC090804.1-201ENST00000448870 490 ntBASIC5.69□□□□□ -1.5
VTA1Q9NP79 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 AC091435.1-201ENST00000505442 584 ntBASIC5.69□□□□□ -1.5
VTA1Q9NP79 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 RNU6-678P-201ENST00000516832 109 ntBASIC5.69□□□□□ -1.5
VTA1Q9NP79 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 ELOCP28-201ENST00000590044 317 ntBASIC5.69□□□□□ -1.5
VTA1Q9NP79 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 AL137072.1-201ENST00000603444 466 ntBASIC5.69□□□□□ -1.5
VTA1Q9NP79 AL022161.1-201ENST00000604390 213 ntBASIC5.69□□□□□ -1.5
VTA1Q9NP79 AL022394.1-201ENST00000606979 292 ntBASIC5.69□□□□□ -1.5
VTA1Q9NP79 AC023813.4-201ENST00000607580 580 ntBASIC5.69□□□□□ -1.5
VTA1Q9NP79 AL355816.1-201ENST00000607951 118 ntBASIC5.69□□□□□ -1.5
VTA1Q9NP79 Z95327.3-201ENST00000610385 572 ntBASIC5.69□□□□□ -1.5
VTA1Q9NP79 AC004223.4-201ENST00000612426 332 ntBASIC5.69□□□□□ -1.5
VTA1Q9NP79 AC069209.1-201ENST00000619282 651 ntBASIC5.69□□□□□ -1.5
VTA1Q9NP79 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 AF001550.2-201ENST00000636643 217 ntBASIC5.69□□□□□ -1.5
VTA1Q9NP79 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.69□□□□□ -1.5
VTA1Q9NP79 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VTA1Q9NP79 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
VTA1Q9NP79 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VTA1Q9NP79 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VTA1Q9NP79 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 DCAF13P3-201ENST00000561147 1334 ntBASIC5.69□□□□□ -1.5
VTA1Q9NP79 AC109315.1-201ENST00000584143 1347 ntBASIC5.69□□□□□ -1.5
VTA1Q9NP79 MFSD8-216ENST00000641147 4009 ntBASIC5.69□□□□□ -1.5
VTA1Q9NP79 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.69□□□□□ -1.5
VTA1Q9NP79 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VTA1Q9NP79 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VTA1Q9NP79 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VTA1Q9NP79 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.68□□□□□ -1.5
VTA1Q9NP79 TRIM51GP-201ENST00000534741 1350 ntBASIC5.68□□□□□ -1.5
VTA1Q9NP79 MAPK10-263ENST00000641052 4307 ntBASIC5.68□□□□□ -1.5
VTA1Q9NP79 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms