Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.94□□□□□ -1.62
UPF2Q9HAU5 HMGN1P5-201ENST00000448591 263 ntBASIC4.94□□□□□ -1.62
UPF2Q9HAU5 DNAJC19P1-201ENST00000455312 319 ntBASIC4.94□□□□□ -1.62
UPF2Q9HAU5 MTND2P6-201ENST00000455337 1030 ntBASIC4.94□□□□□ -1.62
UPF2Q9HAU5 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.94□□□□□ -1.62
UPF2Q9HAU5 AC010307.1-201ENST00000467206 836 ntBASIC4.94□□□□□ -1.62
UPF2Q9HAU5 RPL7P1-201ENST00000468161 747 ntBASIC4.94□□□□□ -1.62
UPF2Q9HAU5 RPL7P9-201ENST00000468715 747 ntBASIC4.94□□□□□ -1.62
UPF2Q9HAU5 RN7SL826P-201ENST00000479724 288 ntBASIC4.94□□□□□ -1.62
UPF2Q9HAU5 AC105233.1-201ENST00000498840 781 ntBASIC4.94□□□□□ -1.62
UPF2Q9HAU5 AC083829.1-201ENST00000503756 657 ntBASIC4.94□□□□□ -1.62
UPF2Q9HAU5 BTF3L4P4-201ENST00000506381 449 ntBASIC4.94□□□□□ -1.62
UPF2Q9HAU5 AC093824.1-201ENST00000508796 343 ntBASIC4.94□□□□□ -1.62
UPF2Q9HAU5 RNA5SP49-201ENST00000516450 115 ntBASIC4.94□□□□□ -1.62
UPF2Q9HAU5 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.94□□□□□ -1.62
UPF2Q9HAU5 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.94□□□□□ -1.62
UPF2Q9HAU5 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
UPF2Q9HAU5 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.94□□□□□ -1.62
UPF2Q9HAU5 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
UPF2Q9HAU5 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.94□□□□□ -1.62
UPF2Q9HAU5 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.94□□□□□ -1.62
UPF2Q9HAU5 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
UPF2Q9HAU5 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC4.94□□□□□ -1.62
UPF2Q9HAU5 MIR4443-201ENST00000585052 53 ntBASIC4.94□□□□□ -1.62
UPF2Q9HAU5 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.94□□□□□ -1.62
UPF2Q9HAU5 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.94□□□□□ -1.62
UPF2Q9HAU5 RMST_5.1-201ENST00000618704 126 ntBASIC4.94□□□□□ -1.62
UPF2Q9HAU5 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
UPF2Q9HAU5 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
UPF2Q9HAU5 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
UPF2Q9HAU5 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.93□□□□□ -1.62
UPF2Q9HAU5 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
UPF2Q9HAU5 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
UPF2Q9HAU5 SNORA60-201ENST00000362396 134 ntBASIC4.93□□□□□ -1.62
UPF2Q9HAU5 RNU6-984P-201ENST00000363236 109 ntBASIC4.93□□□□□ -1.62
UPF2Q9HAU5 RPL23AP59-201ENST00000399415 461 ntBASIC4.93□□□□□ -1.62
UPF2Q9HAU5 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
UPF2Q9HAU5 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.93□□□□□ -1.62
UPF2Q9HAU5 MTCO2P1-201ENST00000424648 477 ntBASIC4.93□□□□□ -1.62
UPF2Q9HAU5 RPEP3-201ENST00000425462 676 ntBASIC4.93□□□□□ -1.62
UPF2Q9HAU5 RNF19BPX-201ENST00000426224 625 ntBASIC4.93□□□□□ -1.62
UPF2Q9HAU5 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.93□□□□□ -1.62
UPF2Q9HAU5 MTCYBP32-201ENST00000427945 1084 ntBASIC4.93□□□□□ -1.62
UPF2Q9HAU5 IFNNP1-201ENST00000429219 553 ntBASIC4.93□□□□□ -1.62
UPF2Q9HAU5 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.93□□□□□ -1.62
UPF2Q9HAU5 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.93□□□□□ -1.62
UPF2Q9HAU5 AC092809.1-201ENST00000441469 474 ntBASIC4.93□□□□□ -1.62
UPF2Q9HAU5 AC007000.2-201ENST00000442564 487 ntBASIC4.93□□□□□ -1.62
UPF2Q9HAU5 AC006011.1-201ENST00000442758 349 ntBASIC4.93□□□□□ -1.62
UPF2Q9HAU5 TVP23BP2-201ENST00000455082 615 ntBASIC4.93□□□□□ -1.62
UPF2Q9HAU5 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.93□□□□□ -1.62
UPF2Q9HAU5 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.93□□□□□ -1.62
UPF2Q9HAU5 RN7SL610P-201ENST00000463845 291 ntBASIC4.93□□□□□ -1.62
UPF2Q9HAU5 OR52A4P-201ENST00000472867 958 ntBASIC4.93□□□□□ -1.62
UPF2Q9HAU5 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.93□□□□□ -1.62
UPF2Q9HAU5 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.93□□□□□ -1.62
UPF2Q9HAU5 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.93□□□□□ -1.62
UPF2Q9HAU5 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.93□□□□□ -1.62
UPF2Q9HAU5 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
UPF2Q9HAU5 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.93□□□□□ -1.62
UPF2Q9HAU5 AC025627.2-201ENST00000576220 160 ntBASIC4.93□□□□□ -1.62
UPF2Q9HAU5 AC114878.2-201ENST00000604863 1251 ntBASIC4.93□□□□□ -1.62
UPF2Q9HAU5 AC034229.4-201ENST00000607861 441 ntBASIC4.93□□□□□ -1.62
UPF2Q9HAU5 AC018645.2-201ENST00000609151 472 ntBASIC4.93□□□□□ -1.62
UPF2Q9HAU5 BX323046.1-201ENST00000610145 535 ntBASIC4.93□□□□□ -1.62
UPF2Q9HAU5 AC091953.3-201ENST00000623220 236 ntBASIC4.93□□□□□ -1.62
UPF2Q9HAU5 AP003497.2-201ENST00000624220 967 ntBASIC4.93□□□□□ -1.62
UPF2Q9HAU5 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.93□□□□□ -1.62
UPF2Q9HAU5 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.93□□□□□ -1.62
UPF2Q9HAU5 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.93□□□□□ -1.62
UPF2Q9HAU5 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.93□□□□□ -1.62
UPF2Q9HAU5 AC116667.1-201ENST00000604855 2072 ntBASIC4.93□□□□□ -1.62
UPF2Q9HAU5 LINC00561-201ENST00000565815 2738 ntBASIC4.93□□□□□ -1.62
UPF2Q9HAU5 HSPA8P17-201ENST00000427029 1382 ntBASIC4.92□□□□□ -1.62
UPF2Q9HAU5 AC009501.3-201ENST00000605001 1352 ntBASIC4.92□□□□□ -1.62
UPF2Q9HAU5 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
UPF2Q9HAU5 RNU4-7P-201ENST00000364758 141 ntBASIC4.92□□□□□ -1.62
UPF2Q9HAU5 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
UPF2Q9HAU5 ST13P16-201ENST00000401760 781 ntBASIC4.92□□□□□ -1.62
UPF2Q9HAU5 RN7SKP182-201ENST00000410772 298 ntBASIC4.92□□□□□ -1.62
UPF2Q9HAU5 NRBF2P2-201ENST00000413087 861 ntBASIC4.92□□□□□ -1.62
UPF2Q9HAU5 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.92□□□□□ -1.62
UPF2Q9HAU5 MTCYBP7-201ENST00000419540 1134 ntBASIC4.92□□□□□ -1.62
UPF2Q9HAU5 ARL2BPP3-201ENST00000421226 480 ntBASIC4.92□□□□□ -1.62
UPF2Q9HAU5 USP9YP9-201ENST00000429406 715 ntBASIC4.92□□□□□ -1.62
UPF2Q9HAU5 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.92□□□□□ -1.62
UPF2Q9HAU5 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.92□□□□□ -1.62
UPF2Q9HAU5 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.92□□□□□ -1.62
UPF2Q9HAU5 ARL5AP3-201ENST00000439327 386 ntBASIC4.92□□□□□ -1.62
UPF2Q9HAU5 AL357520.1-201ENST00000441557 453 ntBASIC4.92□□□□□ -1.62
UPF2Q9HAU5 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.92□□□□□ -1.62
UPF2Q9HAU5 BUD31P2-201ENST00000449374 300 ntBASIC4.92□□□□□ -1.62
UPF2Q9HAU5 NPM1P39-201ENST00000449818 867 ntBASIC4.92□□□□□ -1.62
UPF2Q9HAU5 MTATP6P14-201ENST00000455189 673 ntBASIC4.92□□□□□ -1.62
UPF2Q9HAU5 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.92□□□□□ -1.62
UPF2Q9HAU5 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.92□□□□□ -1.62
UPF2Q9HAU5 STRADBP1-201ENST00000478954 1281 ntBASIC4.92□□□□□ -1.62
UPF2Q9HAU5 RPS27AP16-201ENST00000492222 470 ntBASIC4.92□□□□□ -1.62
UPF2Q9HAU5 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.92□□□□□ -1.62
UPF2Q9HAU5 AC016550.1-201ENST00000505348 785 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms