Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 NANOGP6-201ENST00000429190 847 ntBASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 AC068287.1-201ENST00000430283 295 ntBASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 ACTR3P2-201ENST00000439585 1257 ntBASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 AL451050.1-201ENST00000450126 415 ntBASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 RPL37P3-201ENST00000456825 293 ntBASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 AC011276.1-201ENST00000469688 323 ntBASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 RN7SL303P-201ENST00000469773 251 ntBASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 SYT14P1-201ENST00000481459 721 ntBASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 HMGB1P21-201ENST00000502313 581 ntBASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 AC025459.1-201ENST00000504072 156 ntBASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 AC111193.1-201ENST00000504097 155 ntBASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 MTCO1P31-201ENST00000506355 492 ntBASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 PSMB7P1-201ENST00000556349 514 ntBASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 TVP23BP1-201ENST00000557500 617 ntBASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 AC083899.3-201ENST00000603413 594 ntBASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 AL139286.1-201ENST00000604465 483 ntBASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 AC012603.1-201ENST00000606424 528 ntBASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 AC138393.1-206ENST00000540997 1886 ntBASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LRRC40Q9H9A6 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 AC134882.1-201ENST00000603738 1676 ntBASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 Z82217.1-201ENST00000625157 8149 ntBASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 AC007390.2-201ENST00000606229 3803 ntBASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 AC073429.2-201ENST00000569694 1444 ntBASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 SNORA37-201ENST00000384504 129 ntBASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 MIR124-3-201ENST00000384866 87 ntBASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 MIR585-201ENST00000384887 94 ntBASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 RNU4-25P-201ENST00000410569 230 ntBASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 RN7SKP182-201ENST00000410772 298 ntBASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 RPL37P18-201ENST00000411602 243 ntBASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 RPL26P29-201ENST00000415623 438 ntBASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 AC234782.4-201ENST00000417646 1048 ntBASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 AL732292.1-201ENST00000426692 226 ntBASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 AC023141.6-201ENST00000429418 337 ntBASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 AC105402.2-201ENST00000438503 358 ntBASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 SBDSP1-204ENST00000453858 737 ntBASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 RNA5SP246-201ENST00000458909 119 ntBASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 AC109327.1-201ENST00000471666 403 ntBASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 RN7SKP82-201ENST00000516786 223 ntBASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 AC135001.1-201ENST00000544546 283 ntBASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 POLR2KP1-201ENST00000553226 168 ntBASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 AP001180.3-201ENST00000582221 145 ntBASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 AC007448.1-201ENST00000582714 234 ntBASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 AC245128.3-201ENST00000594721 748 ntBASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 AC008536.1-201ENST00000602872 669 ntBASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 AL161729.3-201ENST00000603533 673 ntBASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 AC242628.1-201ENST00000606810 391 ntBASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LRRC40Q9H9A6 DCAF13P3-201ENST00000561147 1334 ntBASIC4.21□□□□□ -1.73
LRRC40Q9H9A6 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.21□□□□□ -1.73
LRRC40Q9H9A6 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.21□□□□□ -1.73
LRRC40Q9H9A6 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
LRRC40Q9H9A6 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 RNU4-39P-201ENST00000362455 127 ntBASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 RNA5SP239-201ENST00000410218 129 ntBASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 RNU4-74P-201ENST00000411280 161 ntBASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 JKAMPP1-201ENST00000413804 919 ntBASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 AC009480.2-201ENST00000422916 432 ntBASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 DNAJC19P7-201ENST00000428811 344 ntBASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LRRC40Q9H9A6 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms