Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 RPS15AP1-201ENST00000457423 391 ntBASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 AC091180.1-201ENST00000462104 372 ntBASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 RPL7P1-201ENST00000468161 747 ntBASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 RPL7P9-201ENST00000468715 747 ntBASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 RFPL4AP5-201ENST00000514977 504 ntBASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 IGKV3D-34-201ENST00000522638 302 ntBASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 AC012146.2-201ENST00000576545 416 ntBASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 VN1R90P-201ENST00000595717 726 ntBASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 AC008687.2-201ENST00000597865 520 ntBASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 AC010200.2-201ENST00000605098 235 ntBASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 AC109309.2-201ENST00000612597 332 ntBASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 AC092140.2-201ENST00000618027 521 ntBASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 AL731532.2-201ENST00000623542 1953 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 BTBD10P1-201ENST00000549824 1352 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 CASC19-221ENST00000641309 1382 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 AC000374.1-201ENST00000434698 1745 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 U3.3-201ENST00000362986 216 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 RN7SKP113-201ENST00000363891 295 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 SNORA4.1-201ENST00000364263 144 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 AL121978.1-201ENST00000402778 359 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 NPM1P4-201ENST00000414095 812 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 P2RY10P2-201ENST00000416730 913 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 SLC35E1P1-201ENST00000419313 864 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 AC016907.1-201ENST00000419483 435 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 AC108075.1-201ENST00000424692 529 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 ELOCP8-201ENST00000439309 332 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 AL391987.1-201ENST00000441025 200 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 ELOCP15-201ENST00000442090 332 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 AC004980.3-201ENST00000447046 365 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 RPS27AP8-201ENST00000452665 445 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 NIFKP7-201ENST00000503365 834 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 ATP1B1P1-201ENST00000509767 915 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 AC093281.2-201ENST00000510153 597 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 AC117532.1-201ENST00000514638 323 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 SNORA48.10-201ENST00000516965 160 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 RNU6-1261P-201ENST00000517194 104 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 AC027309.2-201ENST00000520566 192 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 OR5AK1P-201ENST00000524837 922 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 FKBP1AP1-201ENST00000594588 318 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 AC112220.3-201ENST00000605502 502 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 AC245297.2-201ENST00000610119 565 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 BX005214.3-202ENST00000619809 325 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 AC009229.4-201ENST00000623854 1947 ntBASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM54Q9BYV2 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms