Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 MIR6867-201ENST00000610636 67 ntBASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 RMST_9.1-201ENST00000619945 193 ntBASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 AC079684.1-201ENST00000621405 437 ntBASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 AC010608.2-201ENST00000624830 470 ntBASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 A2MP1-204ENST00000566278 4130 ntBASIC3.65□□□□□ -1.83
RSPO3Q9BXY4 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 RNA5SP322-201ENST00000363617 119 ntBASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 AMZ2P2-201ENST00000406819 1057 ntBASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 MTND4LP21-201ENST00000415303 295 ntBASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 RAC1P3-201ENST00000416129 580 ntBASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 HMGB1P37-201ENST00000439613 609 ntBASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 MTND6P32-201ENST00000457611 483 ntBASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 AP000926.3-201ENST00000497201 299 ntBASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 MTND2P7-201ENST00000521337 640 ntBASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 AC026616.1-201ENST00000523157 525 ntBASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 AC090877.1-201ENST00000561418 344 ntBASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 MIR3939-201ENST00000582614 106 ntBASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 AC015849.6-201ENST00000605454 474 ntBASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 AL359715.5-201ENST00000623431 443 ntBASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 IPO8P1-201ENST00000455509 3109 ntBASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.64□□□□□ -1.83
RSPO3Q9BXY4 AC005261.4-201ENST00000600047 1385 ntBASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 AC092079.1-201ENST00000558620 1985 ntBASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 RN7SKP44-201ENST00000363602 316 ntBASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 RNU1-89P-201ENST00000384592 164 ntBASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 AL356095.1-201ENST00000417217 199 ntBASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 AC244453.4-201ENST00000419150 388 ntBASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 AC122718.1-201ENST00000439448 744 ntBASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 RSL24D1P2-201ENST00000445584 366 ntBASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 AL359073.1-201ENST00000448036 403 ntBASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 NUTF2P3-201ENST00000448540 384 ntBASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 RPL38P1-201ENST00000460914 211 ntBASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 FAM133DP-201ENST00000464802 691 ntBASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 S100A11P1-201ENST00000477525 312 ntBASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 SYT14P1-201ENST00000481459 721 ntBASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 HMGB1P23-201ENST00000518743 568 ntBASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 AC091167.4-201ENST00000605079 184 ntBASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 ARF4P1-201ENST00000605447 541 ntBASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 AP003392.5-201ENST00000607857 415 ntBASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 AC073530.2-201ENST00000623987 261 ntBASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 AC114546.3-201ENST00000623582 1734 ntBASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 MTCO1P8-201ENST00000416914 1523 ntBASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 AC233968.1-201ENST00000611212 1300 ntBASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RSPO3Q9BXY4 ASNSP1-204ENST00000641977 1664 ntBASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 MIR23B-201ENST00000384832 97 ntBASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 HMGN2P8-201ENST00000391458 268 ntBASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 ZNF603P-201ENST00000405613 487 ntBASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 OR5BE1P-201ENST00000425977 939 ntBASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 USP12PY-201ENST00000427677 1064 ntBASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 IFNNP1-201ENST00000429219 553 ntBASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 MRPL50P1-201ENST00000431951 384 ntBASIC3.62□□□□□ -1.83
RSPO3Q9BXY4 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms