Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
IFT140Q96RY7 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
IFT140Q96RY7 NACA3P-201ENST00000359690 648 ntBASIC6.14□□□□□ -1.43
IFT140Q96RY7 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
IFT140Q96RY7 SNORD17-201ENST00000390930 237 ntBASIC6.14□□□□□ -1.43
IFT140Q96RY7 AC004448.2-201ENST00000422360 586 ntBASIC6.14□□□□□ -1.43
IFT140Q96RY7 AC091862.1-201ENST00000438016 1100 ntBASIC6.14□□□□□ -1.43
IFT140Q96RY7 IGKV1OR-3-201ENST00000446944 348 ntBASIC6.14□□□□□ -1.43
IFT140Q96RY7 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC6.14□□□□□ -1.43
IFT140Q96RY7 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC6.14□□□□□ -1.43
IFT140Q96RY7 AC006504.3-201ENST00000586818 523 ntBASIC6.14□□□□□ -1.43
IFT140Q96RY7 AC015871.5-202ENST00000623252 701 ntBASIC6.14□□□□□ -1.43
IFT140Q96RY7 AC006386.2-201ENST00000624491 75 ntBASIC6.14□□□□□ -1.43
IFT140Q96RY7 AC012005.1-201ENST00000624575 75 ntBASIC6.14□□□□□ -1.43
IFT140Q96RY7 MFSD8-236ENST00000641509 4050 ntBASIC6.14□□□□□ -1.43
IFT140Q96RY7 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
IFT140Q96RY7 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
IFT140Q96RY7 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
IFT140Q96RY7 USP8P1-201ENST00000494673 3183 ntBASIC6.13□□□□□ -1.43
IFT140Q96RY7 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC6.13□□□□□ -1.43
IFT140Q96RY7 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
IFT140Q96RY7 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
IFT140Q96RY7 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
IFT140Q96RY7 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
IFT140Q96RY7 VN1R8P-201ENST00000407739 893 ntBASIC6.13□□□□□ -1.43
IFT140Q96RY7 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC6.13□□□□□ -1.43
IFT140Q96RY7 AC245054.1-201ENST00000420944 258 ntBASIC6.13□□□□□ -1.43
IFT140Q96RY7 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC6.13□□□□□ -1.43
IFT140Q96RY7 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC6.13□□□□□ -1.43
IFT140Q96RY7 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC6.13□□□□□ -1.43
IFT140Q96RY7 S100A11P2-201ENST00000467589 312 ntBASIC6.13□□□□□ -1.43
IFT140Q96RY7 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
IFT140Q96RY7 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC6.13□□□□□ -1.43
IFT140Q96RY7 Vault.1-201ENST00000516474 102 ntBASIC6.13□□□□□ -1.43
IFT140Q96RY7 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.13□□□□□ -1.43
IFT140Q96RY7 SLC25A36P1-201ENST00000590111 465 ntBASIC6.13□□□□□ -1.43
IFT140Q96RY7 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC6.13□□□□□ -1.43
IFT140Q96RY7 AL033523.1-201ENST00000605153 153 ntBASIC6.13□□□□□ -1.43
IFT140Q96RY7 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC6.13□□□□□ -1.43
IFT140Q96RY7 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.13□□□□□ -1.43
IFT140Q96RY7 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
IFT140Q96RY7 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
IFT140Q96RY7 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
IFT140Q96RY7 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC6.13□□□□□ -1.43
IFT140Q96RY7 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
IFT140Q96RY7 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
IFT140Q96RY7 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
IFT140Q96RY7 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC6.12□□□□□ -1.43
IFT140Q96RY7 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
IFT140Q96RY7 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
IFT140Q96RY7 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
IFT140Q96RY7 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
IFT140Q96RY7 OSTCP5-201ENST00000425293 453 ntBASIC6.12□□□□□ -1.43
IFT140Q96RY7 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
IFT140Q96RY7 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC6.12□□□□□ -1.43
IFT140Q96RY7 AP001992.1-205ENST00000462248 379 ntBASIC6.12□□□□□ -1.43
IFT140Q96RY7 RN7SL504P-201ENST00000494496 287 ntBASIC6.12□□□□□ -1.43
IFT140Q96RY7 USP9YP2-201ENST00000504503 1000 ntBASIC6.12□□□□□ -1.43
IFT140Q96RY7 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC6.12□□□□□ -1.43
IFT140Q96RY7 USP9YP1-201ENST00000513521 1002 ntBASIC6.12□□□□□ -1.43
IFT140Q96RY7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC6.12□□□□□ -1.43
IFT140Q96RY7 AL606834.2-201ENST00000602954 668 ntBASIC6.12□□□□□ -1.43
IFT140Q96RY7 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.12□□□□□ -1.43
IFT140Q96RY7 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
IFT140Q96RY7 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
IFT140Q96RY7 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
IFT140Q96RY7 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC6.12□□□□□ -1.43
IFT140Q96RY7 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
IFT140Q96RY7 AC003985.2-201ENST00000562268 1669 ntBASIC6.11□□□□□ -1.43
IFT140Q96RY7 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
IFT140Q96RY7 AL035458.1-201ENST00000433096 585 ntBASIC6.11□□□□□ -1.43
IFT140Q96RY7 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC6.11□□□□□ -1.43
IFT140Q96RY7 Z75741.1-201ENST00000446793 314 ntBASIC6.11□□□□□ -1.43
IFT140Q96RY7 RPL21P8-201ENST00000465083 535 ntBASIC6.11□□□□□ -1.43
IFT140Q96RY7 AC108941.1-201ENST00000502853 530 ntBASIC6.11□□□□□ -1.43
IFT140Q96RY7 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.11□□□□□ -1.43
IFT140Q96RY7 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC6.11□□□□□ -1.43
IFT140Q96RY7 AC034105.3-201ENST00000565294 442 ntBASIC6.11□□□□□ -1.43
IFT140Q96RY7 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC6.11□□□□□ -1.43
IFT140Q96RY7 AL773545.4-201ENST00000637262 310 ntBASIC6.11□□□□□ -1.43
IFT140Q96RY7 AL513478.4-201ENST00000641636 310 ntBASIC6.11□□□□□ -1.43
IFT140Q96RY7 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
IFT140Q96RY7 AC090337.1-201ENST00000579651 2074 ntBASIC6.11□□□□□ -1.43
IFT140Q96RY7 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
IFT140Q96RY7 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC6.1□□□□□ -1.43
IFT140Q96RY7 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
IFT140Q96RY7 SYF2-202ENST00000354361 926 ntTSL 2 BASIC6.1□□□□□ -1.43
IFT140Q96RY7 SNORA80A-201ENST00000363922 136 ntBASIC6.1□□□□□ -1.43
IFT140Q96RY7 RNA5SP424-201ENST00000390988 115 ntBASIC6.1□□□□□ -1.43
IFT140Q96RY7 AL034403.1-201ENST00000399414 885 ntBASIC6.1□□□□□ -1.43
IFT140Q96RY7 MIR1271-201ENST00000408537 86 ntBASIC6.1□□□□□ -1.43
IFT140Q96RY7 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC6.1□□□□□ -1.43
IFT140Q96RY7 RPL27AP5-201ENST00000469428 449 ntBASIC6.1□□□□□ -1.43
IFT140Q96RY7 AC011825.1-201ENST00000484967 388 ntBASIC6.1□□□□□ -1.43
IFT140Q96RY7 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC6.1□□□□□ -1.43
IFT140Q96RY7 MIR5680-201ENST00000577577 84 ntBASIC6.1□□□□□ -1.43
IFT140Q96RY7 AC069209.1-201ENST00000619282 651 ntBASIC6.1□□□□□ -1.43
IFT140Q96RY7 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC6.1□□□□□ -1.43
IFT140Q96RY7 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
IFT140Q96RY7 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms