Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 HMGB1P48-201ENST00000446155 598 ntBASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 AL035090.1-201ENST00000454835 332 ntBASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 DSTNP2-201ENST00000504533 515 ntBASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 AC005178.1-201ENST00000508392 440 ntBASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 RFPL4AP5-201ENST00000514977 504 ntBASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 MTCO3P15-201ENST00000526563 574 ntBASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 YWHABP2-201ENST00000540201 713 ntBASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 MTCO1P40-201ENST00000574371 625 ntBASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 BPTFP1-201ENST00000579209 492 ntBASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 MIR4716-201ENST00000579628 84 ntBASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 AC127024.5-201ENST00000580085 462 ntBASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 AC005771.1-201ENST00000585581 349 ntBASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 AC079089.3-201ENST00000603094 673 ntBASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 AC079395.2-201ENST00000610982 737 ntBASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 AC135068.5-201ENST00000624197 983 ntBASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 AL008636.1-201ENST00000625038 1018 ntBASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 AL731566.1-201ENST00000620490 1937 ntBASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SIMC1Q8NDZ2 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 RN7SKP6-201ENST00000364795 319 ntBASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 ZNF603P-201ENST00000405613 487 ntBASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 OR4K12P-201ENST00000406538 961 ntBASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 AL512430.2-201ENST00000406786 339 ntBASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 RNA5SP487-201ENST00000410186 122 ntBASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 RNU6-757P-201ENST00000410334 100 ntBASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 NPM1P4-201ENST00000414095 812 ntBASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 RIMKLBP2-201ENST00000424737 654 ntBASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 NIPA2P1-201ENST00000426223 976 ntBASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 DPPA2P1-201ENST00000428060 556 ntBASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 GTF2IP7-202ENST00000436677 309 ntBASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 AC092641.1-201ENST00000440229 772 ntBASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 RHEBP2-201ENST00000450289 600 ntBASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 RNA5SP103-201ENST00000459503 118 ntBASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 SIAH1P1-201ENST00000479411 923 ntBASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 RPS6P4-201ENST00000494693 758 ntBASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 AC092709.1-201ENST00000521355 1045 ntBASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 AP002963.1-201ENST00000530590 184 ntBASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 AC022146.1-201ENST00000595307 847 ntBASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 AC017083.3-201ENST00000609955 700 ntBASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 AC124312.6-202ENST00000623624 418 ntBASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SIMC1Q8NDZ2 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms