Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 NPM1P47-201ENST00000560843 856 ntBASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 AC079171.1-201ENST00000568788 914 ntBASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 AL121834.1-201ENST00000572284 509 ntBASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 AC008782.1-201ENST00000603386 430 ntBASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 DUXAP11-201ENST00000603858 526 ntBASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 AC069545.1-201ENST00000605671 358 ntBASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 AC138965.3-201ENST00000623875 498 ntBASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 SGO1P2-201ENST00000429458 1589 ntBASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SMC1BQ8NDV3 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
SMC1BQ8NDV3 AL049737.1-201ENST00000413920 1403 ntBASIC6□□□□□ -1.45
SMC1BQ8NDV3 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC6□□□□□ -1.45
SMC1BQ8NDV3 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SMC1BQ8NDV3 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SMC1BQ8NDV3 AL603750.1-201ENST00000624216 1717 ntBASIC6□□□□□ -1.45
SMC1BQ8NDV3 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SMC1BQ8NDV3 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SMC1BQ8NDV3 HMGB1P5-201ENST00000255320 642 ntBASIC6□□□□□ -1.45
SMC1BQ8NDV3 RNU1-94P-201ENST00000362627 173 ntBASIC6□□□□□ -1.45
SMC1BQ8NDV3 RNA5SP387-201ENST00000364226 106 ntBASIC6□□□□□ -1.45
SMC1BQ8NDV3 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC6□□□□□ -1.45
SMC1BQ8NDV3 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC6□□□□□ -1.45
SMC1BQ8NDV3 ZNF885P-201ENST00000420174 1098 ntBASIC6□□□□□ -1.45
SMC1BQ8NDV3 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC6□□□□□ -1.45
SMC1BQ8NDV3 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC6□□□□□ -1.45
SMC1BQ8NDV3 AC011233.1-201ENST00000422812 283 ntBASIC6□□□□□ -1.45
SMC1BQ8NDV3 AL139421.1-201ENST00000423010 169 ntBASIC6□□□□□ -1.45
SMC1BQ8NDV3 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC6□□□□□ -1.45
SMC1BQ8NDV3 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC6□□□□□ -1.45
SMC1BQ8NDV3 RPS12P10-201ENST00000427031 377 ntBASIC6□□□□□ -1.45
SMC1BQ8NDV3 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC6□□□□□ -1.45
SMC1BQ8NDV3 AL161722.2-201ENST00000434731 981 ntBASIC6□□□□□ -1.45
SMC1BQ8NDV3 YWHAZP7-201ENST00000436906 631 ntBASIC6□□□□□ -1.45
SMC1BQ8NDV3 ARL4AP3-201ENST00000441452 574 ntBASIC6□□□□□ -1.45
SMC1BQ8NDV3 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC6□□□□□ -1.45
SMC1BQ8NDV3 AC079776.3-201ENST00000450665 370 ntBASIC6□□□□□ -1.45
SMC1BQ8NDV3 IGHV5-78-201ENST00000450948 295 ntBASIC6□□□□□ -1.45
SMC1BQ8NDV3 ZNF736P5Y-201ENST00000451173 805 ntBASIC6□□□□□ -1.45
SMC1BQ8NDV3 CYCSP34-201ENST00000458172 304 ntBASIC6□□□□□ -1.45
SMC1BQ8NDV3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC6□□□□□ -1.45
SMC1BQ8NDV3 AC108734.3-201ENST00000481241 1165 ntBASIC6□□□□□ -1.45
SMC1BQ8NDV3 LINC00888-204ENST00000487386 421 ntBASIC6□□□□□ -1.45
SMC1BQ8NDV3 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC6□□□□□ -1.45
SMC1BQ8NDV3 AC116353.3-201ENST00000511215 249 ntBASIC6□□□□□ -1.45
SMC1BQ8NDV3 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC6□□□□□ -1.45
SMC1BQ8NDV3 RNU6-416P-201ENST00000516265 103 ntBASIC6□□□□□ -1.45
SMC1BQ8NDV3 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC6□□□□□ -1.45
SMC1BQ8NDV3 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6□□□□□ -1.45
SMC1BQ8NDV3 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC6□□□□□ -1.45
SMC1BQ8NDV3 CASC16-202ENST00000563844 610 ntTSL 3 BASIC6□□□□□ -1.45
SMC1BQ8NDV3 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC6□□□□□ -1.45
SMC1BQ8NDV3 MIR3158-1-201ENST00000583596 81 ntBASIC6□□□□□ -1.45
SMC1BQ8NDV3 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6□□□□□ -1.45
SMC1BQ8NDV3 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6□□□□□ -1.45
SMC1BQ8NDV3 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC6□□□□□ -1.45
SMC1BQ8NDV3 AC146944.4-201ENST00000602697 718 ntBASIC6□□□□□ -1.45
SMC1BQ8NDV3 AC008814.1-201ENST00000603797 406 ntBASIC6□□□□□ -1.45
SMC1BQ8NDV3 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SMC1BQ8NDV3 AC011939.3-201ENST00000613686 466 ntBASIC6□□□□□ -1.45
SMC1BQ8NDV3 AC023509.5-201ENST00000617434 807 ntBASIC6□□□□□ -1.45
SMC1BQ8NDV3 AC010608.2-201ENST00000624830 470 ntBASIC6□□□□□ -1.45
SMC1BQ8NDV3 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6□□□□□ -1.45
SMC1BQ8NDV3 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SMC1BQ8NDV3 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6□□□□□ -1.45
SMC1BQ8NDV3 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6□□□□□ -1.45
SMC1BQ8NDV3 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SMC1BQ8NDV3 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
SMC1BQ8NDV3 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SMC1BQ8NDV3 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 AL158152.1-201ENST00000602652 1435 ntBASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 RNA5SP187-201ENST00000384400 119 ntBASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 RPEP3-201ENST00000425462 676 ntBASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 DPRXP1-201ENST00000426312 460 ntBASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 VN1R108P-201ENST00000431580 830 ntBASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 RPL23AP83-201ENST00000434984 473 ntBASIC5.99□□□□□ -1.45
SMC1BQ8NDV3 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms