Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AC087650.1-201ENST00000431445 468 ntBASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 AL356276.2-201ENST00000435919 558 ntBASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 HMGB1P37-201ENST00000439613 609 ntBASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 AC009263.1-201ENST00000441193 1239 ntBASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 RPL7P31-201ENST00000450192 724 ntBASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 RPS23P7-201ENST00000466210 444 ntBASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 AC008802.1-201ENST00000519121 791 ntBASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 MIR5047-201ENST00000579212 100 ntBASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 AF230666.2-201ENST00000602328 725 ntBASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 AL139041.1-201ENST00000605480 610 ntBASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 RNU4-89P-201ENST00000607443 133 ntBASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 MIR6868-201ENST00000611215 58 ntBASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 MIR486-1-201ENST00000612171 68 ntBASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 AL591424.2-201ENST00000617023 128 ntBASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 CASC19-261ENST00000641853 1638 ntBASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 AC233968.1-201ENST00000611212 1300 ntBASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TTC9CQ8N5M4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 BDP1P-201ENST00000582658 1990 ntBASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 AL445437.1-201ENST00000623157 3087 ntBASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 FAM3C2-201ENST00000312214 681 ntBASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 SNORA70C-201ENST00000384538 135 ntBASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 MT-RNR1-201ENST00000389680 954 ntBASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 AL022722.2-201ENST00000402519 180 ntBASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 RCC2P2-201ENST00000422174 918 ntBASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 AC083863.1-201ENST00000438811 231 ntBASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 NDUFA5P9-201ENST00000472609 340 ntBASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 STRADBP1-201ENST00000478954 1281 ntBASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 HPRT1P1-201ENST00000509498 657 ntBASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 RN7SKP122-201ENST00000515923 296 ntBASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 IGKV2-23-201ENST00000518729 323 ntBASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 SNX6P1-201ENST00000601728 1224 ntBASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 AL135786.2-201ENST00000608422 615 ntBASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 C2orf27A-204ENST00000623058 969 ntBASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 AC112484.5-201ENST00000624189 228 ntBASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 MIR6830-201ENST00000636015 70 ntBASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 AL929601.4-201ENST00000613011 1341 ntBASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.13□□□□□ -1.91
TTC9CQ8N5M4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.12□□□□□ -1.91
TTC9CQ8N5M4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.12□□□□□ -1.91
TTC9CQ8N5M4 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.12□□□□□ -1.91
TTC9CQ8N5M4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TTC9CQ8N5M4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TTC9CQ8N5M4 UBE3AP2-201ENST00000429033 2259 ntBASIC3.12□□□□□ -1.91
TTC9CQ8N5M4 PRO1804-201ENST00000623780 2050 ntBASIC3.12□□□□□ -1.91
TTC9CQ8N5M4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TTC9CQ8N5M4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TTC9CQ8N5M4 ASNSP1-204ENST00000641977 1664 ntBASIC3.12□□□□□ -1.91
TTC9CQ8N5M4 RNA5SP399-201ENST00000364003 117 ntBASIC3.12□□□□□ -1.91
TTC9CQ8N5M4 RNA5SP130-201ENST00000364431 114 ntBASIC3.12□□□□□ -1.91
TTC9CQ8N5M4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
TTC9CQ8N5M4 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TTC9CQ8N5M4 AL356095.1-201ENST00000417217 199 ntBASIC3.12□□□□□ -1.91
TTC9CQ8N5M4 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.12□□□□□ -1.91
TTC9CQ8N5M4 AL356535.1-201ENST00000440335 398 ntBASIC3.12□□□□□ -1.91
TTC9CQ8N5M4 CEACAMP4-201ENST00000457676 421 ntBASIC3.12□□□□□ -1.91
TTC9CQ8N5M4 RPS7P7-201ENST00000463499 571 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms