Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 RNU6-433P-201ENST00000363216 104 ntBASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 EIF5P1-201ENST00000400019 1231 ntBASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 RN7SKP17-201ENST00000411242 351 ntBASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 Y_RNA.625-201ENST00000411256 107 ntBASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 AC109780.2-201ENST00000413467 845 ntBASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 AC004022.2-201ENST00000413824 193 ntBASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 AL139128.1-201ENST00000413921 941 ntBASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 NUP35P2-201ENST00000416748 943 ntBASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 RPL7P30-201ENST00000420888 709 ntBASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 AC093655.2-201ENST00000425735 631 ntBASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 KCTD10P1-201ENST00000434203 625 ntBASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 RPS11P7-201ENST00000442125 465 ntBASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 RPS15AP17-201ENST00000470598 390 ntBASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 AC114981.1-201ENST00000503897 678 ntBASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 AC087276.1-201ENST00000529659 480 ntBASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 AL390726.5-202ENST00000564800 256 ntBASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 MIR4637-201ENST00000582405 84 ntBASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 AL353600.1-201ENST00000608148 251 ntBASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 AL159169.3-201ENST00000608871 561 ntBASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 Mico1.1-201ENST00000611698 204 ntBASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 AC025574.2-201ENST00000615621 514 ntBASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 AC018816.2-201ENST00000621460 353 ntBASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 AP002799.1-201ENST00000623552 423 ntBASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
SYNPOQ8N3V7 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 SAMMSON-213ENST00000641336 1521 ntBASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 MTND5P28-201ENST00000438005 1594 ntBASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 RNU11-201ENST00000387069 134 ntBASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 AC025750.1-201ENST00000399891 379 ntBASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 RNF10P1-201ENST00000418589 369 ntBASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 CENPIP1-201ENST00000425713 902 ntBASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 AL590762.4-201ENST00000425885 253 ntBASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 AL365184.2-201ENST00000431139 435 ntBASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 RPS20P1-201ENST00000434853 354 ntBASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 BMI1P1-201ENST00000445879 941 ntBASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 RPL7P22-201ENST00000466005 733 ntBASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 AC004069.2-201ENST00000505438 1114 ntBASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 AC116347.2-201ENST00000514912 523 ntBASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 AC141257.3-201ENST00000572906 215 ntBASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 LARP7P2-201ENST00000575306 125 ntBASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 AP001004.1-201ENST00000582468 324 ntBASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 AC068790.6-201ENST00000602558 258 ntBASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 AC025857.2-201ENST00000602711 238 ntBASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 AL360012.1-201ENST00000602813 131 ntBASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 AC013562.2-201ENST00000611632 603 ntBASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 AC078899.5-201ENST00000612475 178 ntBASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 AC010678.1-201ENST00000614118 713 ntBASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.65□□□□□ -1.5
SYNPOQ8N3V7 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SYNPOQ8N3V7 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SYNPOQ8N3V7 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
SYNPOQ8N3V7 PHKBP1-201ENST00000450951 1951 ntBASIC5.65□□□□□ -1.51
SYNPOQ8N3V7 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SYNPOQ8N3V7 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
SYNPOQ8N3V7 Z95114.1-201ENST00000624264 14574 ntBASIC5.65□□□□□ -1.51
SYNPOQ8N3V7 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms