Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 AC118282.2-201ENST00000508739 374 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 AC091868.1-201ENST00000508746 304 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 AC113347.3-201ENST00000509113 148 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 Y_RNA.719-201ENST00000517156 106 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 RN7SKP283-201ENST00000517197 270 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 OR5M2P-201ENST00000529003 936 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 AC044913.1-201ENST00000557200 430 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 RN7SL802P-201ENST00000577858 299 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 AC209154.1-201ENST00000582156 337 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 PSMA6P4-201ENST00000603247 718 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 AL357094.1-201ENST00000603845 844 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 AC021749.1-201ENST00000604322 607 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 AC016877.3-201ENST00000606778 504 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 AP000238.1-201ENST00000608759 426 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 AL592148.2-201ENST00000612210 372 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 MIR8069-1-201ENST00000616627 86 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 AC018926.3-201ENST00000618841 406 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 MIR8069-2-201ENST00000621412 86 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 AP002782.1-201ENST00000623107 614 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 MIR7641-1-201ENST00000627518 61 ntBASIC4.42□□□□□ -1.7
BEST3Q8N1M1 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BEST3Q8N1M1 MTND4P10-201ENST00000446199 1363 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BEST3Q8N1M1 AC025263.3-201ENST00000622965 1396 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 AL442639.1-201ENST00000625030 1899 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 AC119744.1-201ENST00000454746 1715 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
BEST3Q8N1M1 TLK1P1-201ENST00000456760 2440 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 AC009643.2-201ENST00000603543 1448 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
BEST3Q8N1M1 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
BEST3Q8N1M1 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
BEST3Q8N1M1 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
BEST3Q8N1M1 RNU1-32P-201ENST00000363937 159 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 AF228730.1-201ENST00000397972 663 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 RN7SKP199-201ENST00000410325 305 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 RNU2-6P-201ENST00000411404 190 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 OR4K6P-201ENST00000416478 897 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 RPS24P7-201ENST00000416921 246 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 AL356320.2-201ENST00000417263 507 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 LINC00993-201ENST00000420453 540 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.41□□□□□ -1.7
BEST3Q8N1M1 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.41□□□□□ -1.7
BEST3Q8N1M1 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.41□□□□□ -1.7
BEST3Q8N1M1 MTND1P26-201ENST00000440488 538 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.41□□□□□ -1.7
BEST3Q8N1M1 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.41□□□□□ -1.7
BEST3Q8N1M1 AC004022.1-201ENST00000447766 1066 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.41□□□□□ -1.7
BEST3Q8N1M1 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.41□□□□□ -1.7
BEST3Q8N1M1 RPL10P17-201ENST00000453852 316 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 RN7SL517P-201ENST00000462240 305 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.41□□□□□ -1.7
BEST3Q8N1M1 AC111000.3-201ENST00000508057 576 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BEST3Q8N1M1 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.41□□□□□ -1.7
BEST3Q8N1M1 RNU1-6P-201ENST00000516290 144 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 RNU6-709P-201ENST00000517257 104 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 AC023632.1-201ENST00000518463 375 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 RPL23AP53-201ENST00000521854 457 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.41□□□□□ -1.7
BEST3Q8N1M1 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.41□□□□□ -1.7
BEST3Q8N1M1 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.41□□□□□ -1.7
BEST3Q8N1M1 AC009097.3-201ENST00000563557 1018 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 MTND3P13-201ENST00000574391 343 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 MIR5699-201ENST00000578903 90 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.41□□□□□ -1.7
BEST3Q8N1M1 MIR5708-201ENST00000579723 85 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.41□□□□□ -1.7
BEST3Q8N1M1 MIR4666A-201ENST00000580160 79 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 RN7SL690P-201ENST00000582087 240 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.41□□□□□ -1.7
BEST3Q8N1M1 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.41□□□□□ -1.7
BEST3Q8N1M1 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.41□□□□□ -1.7
BEST3Q8N1M1 MIR378J-201ENST00000611988 109 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.41□□□□□ -1.7
BEST3Q8N1M1 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.41□□□□□ -1.7
BEST3Q8N1M1 AC116563.2-201ENST00000624751 535 ntBASIC4.41□□□□□ -1.7
BEST3Q8N1M1 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms