Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC005156.1-201ENST00000613371 573 ntBASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 AC006133.1-201ENST00000617106 264 ntBASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 AC073569.3-201ENST00000619055 682 ntBASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 AC010608.3-201ENST00000625048 527 ntBASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 AC099654.8-201ENST00000637757 681 ntBASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
LYSMD4Q5XG99 AL445437.1-201ENST00000623157 3087 ntBASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 RNA5SP513-201ENST00000364648 118 ntBASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 RNU6-468P-201ENST00000384003 109 ntBASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 AC073310.1-201ENST00000423226 1033 ntBASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 DEFB130D-201ENST00000426866 237 ntBASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 FO393414.1-201ENST00000428697 1184 ntBASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 AC239809.1-201ENST00000450470 217 ntBASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 TPMTP4-201ENST00000450749 678 ntBASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 AL035407.2-201ENST00000454090 378 ntBASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 AC006511.1-201ENST00000470614 315 ntBASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 AC090686.1-201ENST00000481577 749 ntBASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 RPS27AP13-201ENST00000498403 237 ntBASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 RNA5SP249-201ENST00000516127 99 ntBASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 SNORA67.7-201ENST00000516664 135 ntBASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 RNU1-45P-201ENST00000517191 141 ntBASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 AC090666.1-201ENST00000578241 445 ntBASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 BNIP3P40-201ENST00000596017 556 ntBASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 AL391001.1-201ENST00000602747 715 ntBASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 AC068620.3-201ENST00000602749 560 ntBASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 BPIFA4P-203ENST00000603168 689 ntBASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 AL355816.1-201ENST00000607951 118 ntBASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 FRG1HP-204ENST00000617940 757 ntBASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 U6.48-201ENST00000618523 106 ntBASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 AC006042.3-201ENST00000454684 1469 ntBASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.37□□□□□ -1.71
LYSMD4Q5XG99 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LYSMD4Q5XG99 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
LYSMD4Q5XG99 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
LYSMD4Q5XG99 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
LYSMD4Q5XG99 AL355852.1-201ENST00000454081 1771 ntBASIC4.36□□□□□ -1.71
LYSMD4Q5XG99 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LYSMD4Q5XG99 MIR670-201ENST00000390142 98 ntBASIC4.36□□□□□ -1.71
LYSMD4Q5XG99 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.36□□□□□ -1.71
LYSMD4Q5XG99 HMGB3P19-201ENST00000403971 560 ntBASIC4.36□□□□□ -1.71
LYSMD4Q5XG99 AL590290.1-201ENST00000405336 380 ntBASIC4.36□□□□□ -1.71
LYSMD4Q5XG99 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.36□□□□□ -1.71
LYSMD4Q5XG99 AC104333.2-201ENST00000422630 192 ntBASIC4.36□□□□□ -1.71
LYSMD4Q5XG99 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.36□□□□□ -1.71
LYSMD4Q5XG99 AC013262.1-201ENST00000426710 252 ntBASIC4.36□□□□□ -1.71
LYSMD4Q5XG99 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LYSMD4Q5XG99 BTF3P10-201ENST00000433415 495 ntBASIC4.36□□□□□ -1.71
LYSMD4Q5XG99 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.36□□□□□ -1.71
LYSMD4Q5XG99 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LYSMD4Q5XG99 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms