Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PRPF38BQ5VTL8 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
PRPF38BQ5VTL8 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC7.16□□□□□ -1.26
PRPF38BQ5VTL8 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PRPF38BQ5VTL8 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PRPF38BQ5VTL8 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.16□□□□□ -1.26
PRPF38BQ5VTL8 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.16□□□□□ -1.26
PRPF38BQ5VTL8 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PRPF38BQ5VTL8 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
PRPF38BQ5VTL8 AC015871.3-201ENST00000618835 2261 ntBASIC7.16□□□□□ -1.26
PRPF38BQ5VTL8 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.16□□□□□ -1.26
PRPF38BQ5VTL8 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
PRPF38BQ5VTL8 Z99129.4-201ENST00000624649 2435 ntBASIC7.16□□□□□ -1.26
PRPF38BQ5VTL8 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PRPF38BQ5VTL8 AC134882.1-201ENST00000603738 1676 ntBASIC7.16□□□□□ -1.26
PRPF38BQ5VTL8 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 RN7SKP174-201ENST00000363803 330 ntBASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 RNU6-729P-201ENST00000384399 107 ntBASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 AL359634.1-202ENST00000404721 284 ntBASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 RNU4-14P-201ENST00000410858 122 ntBASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 RPL23AP27-201ENST00000415161 451 ntBASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 AL590762.4-201ENST00000425885 253 ntBASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 AC107399.1-201ENST00000451226 265 ntBASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 HMGB1P15-201ENST00000453854 435 ntBASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 AL035090.1-201ENST00000454835 332 ntBASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 SCARNA18.1-201ENST00000516330 83 ntBASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 Y_RNA.682-201ENST00000516457 100 ntBASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 RN7SKP66-201ENST00000516681 231 ntBASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 RNU6-273P-201ENST00000516937 96 ntBASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 OR5BN1P-201ENST00000532955 829 ntBASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 AC063950.1-201ENST00000552036 308 ntBASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 RPL21P12-201ENST00000559810 515 ntBASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 GMFG-212ENST00000602185 423 ntTSL 3 BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 AC068768.2-201ENST00000602352 343 ntBASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 AL355333.1-201ENST00000605632 279 ntBASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 AC068870.2-201ENST00000620635 389 ntBASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 PRNCR1-201ENST00000635449 12727 ntBASIC7.15□□□□□ -1.26
PRPF38BQ5VTL8 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.27
PRPF38BQ5VTL8 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
PRPF38BQ5VTL8 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
PRPF38BQ5VTL8 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
PRPF38BQ5VTL8 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
PRPF38BQ5VTL8 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.27
PRPF38BQ5VTL8 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 Y_RNA.187-201ENST00000363918 113 ntBASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 Y_RNA.367-201ENST00000365544 101 ntBASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 AL606923.1-201ENST00000406616 190 ntBASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 RN7SKP235-201ENST00000410662 305 ntBASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 PMCHL1-202ENST00000423102 261 ntBASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 RPL34P6-201ENST00000432390 345 ntBASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.14□□□□□ -1.27
PRPF38BQ5VTL8 RPS3AP52-201ENST00000435639 297 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms