Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 HMGN1P11-201ENST00000508668 303 ntBASIC2.45□□□□□ -2.02
VPS13DQ5THJ4 AC011270.1-201ENST00000558606 583 ntBASIC2.45□□□□□ -2.02
VPS13DQ5THJ4 MIR5004-201ENST00000579078 107 ntBASIC2.45□□□□□ -2.02
VPS13DQ5THJ4 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC2.45□□□□□ -2.02
VPS13DQ5THJ4 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC2.45□□□□□ -2.02
VPS13DQ5THJ4 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
VPS13DQ5THJ4 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 AP002001.2-201ENST00000529025 1469 ntBASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 HMGB3P9-201ENST00000441799 583 ntBASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 AC011611.1-201ENST00000552179 197 ntBASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 AC093524.1-201ENST00000564266 1094 ntBASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 AC107294.1-201ENST00000609524 467 ntBASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 MAPK10-320ENST00000641462 6696 ntBASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 SNORA38.1-201ENST00000364172 131 ntBASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 AC005019.1-201ENST00000436455 431 ntBASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 RPL12P46-201ENST00000436610 195 ntBASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 AC093663.1-201ENST00000497190 394 ntBASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 AC023389.2-201ENST00000580031 955 ntBASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 MIR4513-201ENST00000581077 86 ntBASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 AL139395.1-201ENST00000603662 160 ntBASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 Xist_exon4.1-201ENST00000615964 126 ntBASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 ATP5A1P2-202ENST00000616464 443 ntBASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 OR51C1P-202ENST00000641159 1444 ntBASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 RN7SKP18-201ENST00000516005 275 ntBASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 AC018442.3-201ENST00000523025 183 ntBASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 AL732618.1-201ENST00000623251 301 ntBASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC2.44□□□□□ -2.02
VPS13DQ5THJ4 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 ANKRD36P1-201ENST00000344424 659 ntBASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 RNU4-35P-201ENST00000362588 141 ntBASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 AC087650.1-201ENST00000431445 468 ntBASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 RN7SKP289-201ENST00000517244 295 ntBASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 KLKP1-201ENST00000595979 403 ntBASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 AC026422.1-201ENST00000623961 452 ntBASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 AC007656.2-201ENST00000624902 4547 ntBASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 BTG4P1-201ENST00000510421 183 ntBASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 AC092868.3-201ENST00000560515 784 ntBASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 AL606834.2-201ENST00000602954 668 ntBASIC2.43□□□□□ -2.02
VPS13DQ5THJ4 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms