Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC38Q502W7 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.09□□□□□ -1.6
CCDC38Q502W7 PABPC1P6-201ENST00000445594 1829 ntBASIC5.09□□□□□ -1.6
CCDC38Q502W7 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC38Q502W7 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC38Q502W7 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
CCDC38Q502W7 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC38Q502W7 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC38Q502W7 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC38Q502W7 NACA3P-201ENST00000359690 648 ntBASIC5.08□□□□□ -1.6
CCDC38Q502W7 RNU6-582P-201ENST00000362989 107 ntBASIC5.08□□□□□ -1.6
CCDC38Q502W7 RNU6-444P-201ENST00000383988 108 ntBASIC5.08□□□□□ -1.6
CCDC38Q502W7 SNORA70.10-201ENST00000384515 134 ntBASIC5.08□□□□□ -1.6
CCDC38Q502W7 SNORD65.1-201ENST00000390889 71 ntBASIC5.08□□□□□ -1.6
CCDC38Q502W7 ERHP2-201ENST00000402323 299 ntBASIC5.08□□□□□ -1.6
CCDC38Q502W7 MIR1178-201ENST00000408396 91 ntBASIC5.08□□□□□ -1.6
CCDC38Q502W7 RN7SKP278-201ENST00000410504 342 ntBASIC5.08□□□□□ -1.6
CCDC38Q502W7 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC38Q502W7 AC009237.10-201ENST00000414112 510 ntBASIC5.08□□□□□ -1.6
CCDC38Q502W7 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CCDC38Q502W7 EIF4EP1-201ENST00000422311 642 ntBASIC5.08□□□□□ -1.6
CCDC38Q502W7 AL138785.1-201ENST00000425821 331 ntBASIC5.08□□□□□ -1.6
CCDC38Q502W7 BRWD1P3-201ENST00000428816 390 ntBASIC5.08□□□□□ -1.6
CCDC38Q502W7 Z73417.1-201ENST00000447373 778 ntBASIC5.08□□□□□ -1.6
CCDC38Q502W7 AC005008.1-201ENST00000456151 612 ntBASIC5.08□□□□□ -1.6
CCDC38Q502W7 NF1P3-201ENST00000457709 450 ntBASIC5.08□□□□□ -1.6
CCDC38Q502W7 RN7SL172P-201ENST00000460535 303 ntBASIC5.08□□□□□ -1.6
CCDC38Q502W7 RN7SL799P-201ENST00000475891 298 ntBASIC5.08□□□□□ -1.6
CCDC38Q502W7 AC020890.1-201ENST00000491837 504 ntBASIC5.08□□□□□ -1.6
CCDC38Q502W7 AC118282.1-201ENST00000506408 765 ntBASIC5.08□□□□□ -1.6
CCDC38Q502W7 AC114322.1-201ENST00000506771 926 ntBASIC5.08□□□□□ -1.6
CCDC38Q502W7 MTATP6P22-201ENST00000507369 598 ntBASIC5.08□□□□□ -1.6
CCDC38Q502W7 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC38Q502W7 AC005351.1-201ENST00000511152 786 ntBASIC5.08□□□□□ -1.6
CCDC38Q502W7 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC38Q502W7 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC38Q502W7 RNU6-885P-201ENST00000516607 104 ntBASIC5.08□□□□□ -1.6
CCDC38Q502W7 AC012339.2-201ENST00000523996 453 ntBASIC5.08□□□□□ -1.6
CCDC38Q502W7 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC38Q502W7 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.08□□□□□ -1.6
CCDC38Q502W7 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC38Q502W7 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC38Q502W7 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC38Q502W7 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC38Q502W7 AC016180.1-201ENST00000567945 403 ntBASIC5.08□□□□□ -1.6
CCDC38Q502W7 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC38Q502W7 AGGF1P6-201ENST00000569213 976 ntBASIC5.08□□□□□ -1.6
CCDC38Q502W7 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC38Q502W7 AP001269.3-201ENST00000588718 329 ntBASIC5.08□□□□□ -1.6
CCDC38Q502W7 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC38Q502W7 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC38Q502W7 AL354760.1-201ENST00000608357 643 ntBASIC5.08□□□□□ -1.6
CCDC38Q502W7 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CCDC38Q502W7 AC099494.2-201ENST00000623371 978 ntBASIC5.08□□□□□ -1.6
CCDC38Q502W7 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
CCDC38Q502W7 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC38Q502W7 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC38Q502W7 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC38Q502W7 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CCDC38Q502W7 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC38Q502W7 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC38Q502W7 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC38Q502W7 Z99496.1-201ENST00000469424 1477 ntBASIC5.07□□□□□ -1.6
CCDC38Q502W7 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC38Q502W7 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC38Q502W7 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC38Q502W7 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC38Q502W7 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC38Q502W7 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC38Q502W7 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCDC38Q502W7 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC38Q502W7 MIR513B-201ENST00000385136 84 ntBASIC5.07□□□□□ -1.6
CCDC38Q502W7 RNU6-1242P-201ENST00000391052 103 ntBASIC5.07□□□□□ -1.6
CCDC38Q502W7 DSTNP4-201ENST00000399472 474 ntBASIC5.07□□□□□ -1.6
CCDC38Q502W7 AL592291.1-201ENST00000403830 352 ntBASIC5.07□□□□□ -1.6
CCDC38Q502W7 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC38Q502W7 AC073136.2-201ENST00000417282 849 ntBASIC5.07□□□□□ -1.6
CCDC38Q502W7 BX510359.3-201ENST00000422168 306 ntBASIC5.07□□□□□ -1.6
CCDC38Q502W7 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC38Q502W7 CKS1BP6-201ENST00000424932 240 ntBASIC5.07□□□□□ -1.6
CCDC38Q502W7 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC38Q502W7 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC38Q502W7 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC38Q502W7 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC38Q502W7 SEPT7P5-201ENST00000434048 306 ntBASIC5.07□□□□□ -1.6
CCDC38Q502W7 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC38Q502W7 YWHAZP8-201ENST00000436935 731 ntBASIC5.07□□□□□ -1.6
CCDC38Q502W7 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC38Q502W7 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC38Q502W7 HMGB3P9-201ENST00000441799 583 ntBASIC5.07□□□□□ -1.6
CCDC38Q502W7 COX6CP18-201ENST00000448769 222 ntBASIC5.07□□□□□ -1.6
CCDC38Q502W7 IFNWP4-201ENST00000453148 294 ntBASIC5.07□□□□□ -1.6
CCDC38Q502W7 AL389915.2-201ENST00000454576 441 ntBASIC5.07□□□□□ -1.6
CCDC38Q502W7 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC38Q502W7 PNPLA4P1-201ENST00000458328 305 ntBASIC5.07□□□□□ -1.6
CCDC38Q502W7 AC108751.2-201ENST00000469993 231 ntBASIC5.07□□□□□ -1.6
CCDC38Q502W7 RN7SL222P-201ENST00000476452 299 ntBASIC5.07□□□□□ -1.6
CCDC38Q502W7 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.07□□□□□ -1.6
CCDC38Q502W7 MTND4LP2-201ENST00000502312 285 ntBASIC5.07□□□□□ -1.6
CCDC38Q502W7 AC008638.1-201ENST00000506035 866 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms