Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SCN1BQ07699 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.19□□□□□ -1.74
SCN1BQ07699 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.19□□□□□ -1.74
SCN1BQ07699 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.19□□□□□ -1.74
SCN1BQ07699 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.19□□□□□ -1.74
SCN1BQ07699 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.19□□□□□ -1.74
SCN1BQ07699 AC090151.1-201ENST00000520784 730 ntBASIC4.19□□□□□ -1.74
SCN1BQ07699 AP001207.1-201ENST00000524051 481 ntBASIC4.19□□□□□ -1.74
SCN1BQ07699 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.19□□□□□ -1.74
SCN1BQ07699 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.19□□□□□ -1.74
SCN1BQ07699 MIR1269B-201ENST00000580405 75 ntBASIC4.19□□□□□ -1.74
SCN1BQ07699 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.19□□□□□ -1.74
SCN1BQ07699 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.19□□□□□ -1.74
SCN1BQ07699 AP001542.2-201ENST00000593141 364 ntBASIC4.19□□□□□ -1.74
SCN1BQ07699 DNAJC19P3-201ENST00000594491 331 ntBASIC4.19□□□□□ -1.74
SCN1BQ07699 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.19□□□□□ -1.74
SCN1BQ07699 AC103792.1-201ENST00000603591 919 ntBASIC4.19□□□□□ -1.74
SCN1BQ07699 AL139395.1-201ENST00000603662 160 ntBASIC4.19□□□□□ -1.74
SCN1BQ07699 AC011453.2-201ENST00000603737 729 ntBASIC4.19□□□□□ -1.74
SCN1BQ07699 OR7A19P-201ENST00000608051 733 ntBASIC4.19□□□□□ -1.74
SCN1BQ07699 AC124016.2-201ENST00000610058 665 ntBASIC4.19□□□□□ -1.74
SCN1BQ07699 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.19□□□□□ -1.74
SCN1BQ07699 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.19□□□□□ -1.74
SCN1BQ07699 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SCN1BQ07699 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.19□□□□□ -1.74
SCN1BQ07699 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SCN1BQ07699 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.19□□□□□ -1.74
SCN1BQ07699 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
SCN1BQ07699 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.19□□□□□ -1.74
SCN1BQ07699 AL122126.1-201ENST00000546905 1318 ntBASIC4.19□□□□□ -1.74
SCN1BQ07699 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SCN1BQ07699 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SCN1BQ07699 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.18□□□□□ -1.74
SCN1BQ07699 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SCN1BQ07699 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
SCN1BQ07699 AC111188.2-201ENST00000529697 1387 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 SNORD74.4-201ENST00000364129 80 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SCN1BQ07699 MIR708-201ENST00000390708 88 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 AL355379.1-201ENST00000405542 640 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.18□□□□□ -1.74
SCN1BQ07699 AC233981.1-201ENST00000423224 461 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.18□□□□□ -1.74
SCN1BQ07699 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.18□□□□□ -1.74
SCN1BQ07699 SKP1P3-201ENST00000429280 487 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.18□□□□□ -1.74
SCN1BQ07699 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.18□□□□□ -1.74
SCN1BQ07699 AL590399.6-201ENST00000446396 307 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.18□□□□□ -1.74
SCN1BQ07699 PPIAP20-201ENST00000449839 135 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 AL121877.1-201ENST00000453704 622 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 AL389915.2-201ENST00000454576 441 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.18□□□□□ -1.74
SCN1BQ07699 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.18□□□□□ -1.74
SCN1BQ07699 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.18□□□□□ -1.74
SCN1BQ07699 TMEM248P1-201ENST00000510579 951 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 AC006499.6-201ENST00000511169 607 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
SCN1BQ07699 RNU4-60P-201ENST00000517239 135 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 IGLV3-26-201ENST00000520756 302 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 AP003102.1-201ENST00000525638 661 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.18□□□□□ -1.74
SCN1BQ07699 OR4A46P-201ENST00000527255 933 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 OR5BC1P-201ENST00000529327 739 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.18□□□□□ -1.74
SCN1BQ07699 OR7E128P-201ENST00000532736 1024 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.18□□□□□ -1.74
SCN1BQ07699 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.18□□□□□ -1.74
SCN1BQ07699 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.18□□□□□ -1.74
SCN1BQ07699 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.18□□□□□ -1.74
SCN1BQ07699 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.18□□□□□ -1.74
SCN1BQ07699 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.18□□□□□ -1.74
SCN1BQ07699 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.18□□□□□ -1.74
SCN1BQ07699 AC209154.1-201ENST00000582156 337 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.18□□□□□ -1.74
SCN1BQ07699 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.18□□□□□ -1.74
SCN1BQ07699 AC090330.1-201ENST00000588646 764 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 AC006116.7-201ENST00000590141 756 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 RPAP2P1-201ENST00000603626 1168 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 AC007566.2-201ENST00000603642 413 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 RNA5SP108-201ENST00000605921 117 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 AC112503.1-201ENST00000608436 391 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 AP000238.1-201ENST00000608759 426 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.18□□□□□ -1.74
SCN1BQ07699 VN1R7P-201ENST00000619242 903 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.18□□□□□ -1.74
SCN1BQ07699 AL359757.1-201ENST00000623176 255 ntBASIC4.18□□□□□ -1.74
SCN1BQ07699 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.18□□□□□ -1.74
SCN1BQ07699 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SCN1BQ07699 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SCN1BQ07699 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.18□□□□□ -1.74
SCN1BQ07699 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.18□□□□□ -1.74
SCN1BQ07699 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SCN1BQ07699 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SCN1BQ07699 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SCN1BQ07699 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SCN1BQ07699 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms