Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AL031736.2-201ENST00000426573 787 ntBASIC3.79□□□□□ -1.8
CLDN18P56856 AC092017.2-201ENST00000427600 362 ntBASIC3.79□□□□□ -1.8
CLDN18P56856 AL160175.1-201ENST00000428124 247 ntBASIC3.79□□□□□ -1.8
CLDN18P56856 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.79□□□□□ -1.8
CLDN18P56856 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN18P56856 RPS29P19-201ENST00000479709 171 ntBASIC3.79□□□□□ -1.8
CLDN18P56856 AC012170.1-201ENST00000495139 359 ntBASIC3.79□□□□□ -1.8
CLDN18P56856 RPL30P11-201ENST00000495304 339 ntBASIC3.79□□□□□ -1.8
CLDN18P56856 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN18P56856 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN18P56856 MTATP6P22-201ENST00000507369 598 ntBASIC3.79□□□□□ -1.8
CLDN18P56856 OR5H4P-201ENST00000510851 923 ntBASIC3.79□□□□□ -1.8
CLDN18P56856 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN18P56856 RNA5SP315-201ENST00000516340 116 ntBASIC3.79□□□□□ -1.8
CLDN18P56856 RNA5SP312-201ENST00000517068 116 ntBASIC3.79□□□□□ -1.8
CLDN18P56856 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.79□□□□□ -1.8
CLDN18P56856 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN18P56856 PHBP17-201ENST00000528576 541 ntBASIC3.79□□□□□ -1.8
CLDN18P56856 AC105233.3-201ENST00000531125 744 ntBASIC3.79□□□□□ -1.8
CLDN18P56856 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN18P56856 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN18P56856 AC067852.4-201ENST00000590314 478 ntBASIC3.79□□□□□ -1.8
CLDN18P56856 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.79□□□□□ -1.8
CLDN18P56856 MIMT1-201ENST00000597105 1050 ntBASIC3.79□□□□□ -1.8
CLDN18P56856 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN18P56856 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN18P56856 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN18P56856 AC099669.2-201ENST00000616549 437 ntBASIC3.79□□□□□ -1.8
CLDN18P56856 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN18P56856 AC055839.1-201ENST00000634467 498 ntBASIC3.79□□□□□ -1.8
CLDN18P56856 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN18P56856 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN18P56856 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN18P56856 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN18P56856 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN18P56856 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN18P56856 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CLDN18P56856 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN18P56856 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN18P56856 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN18P56856 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN18P56856 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CLDN18P56856 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CLDN18P56856 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN18P56856 AC138393.1-206ENST00000540997 1886 ntBASIC3.78□□□□□ -1.8
CLDN18P56856 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN18P56856 RNU4-31P-201ENST00000384211 141 ntBASIC3.78□□□□□ -1.8
CLDN18P56856 MIR1179-201ENST00000408703 91 ntBASIC3.78□□□□□ -1.8
CLDN18P56856 RN7SKP33-201ENST00000410942 340 ntBASIC3.78□□□□□ -1.8
CLDN18P56856 LINC01881-201ENST00000416103 412 ntBASIC3.78□□□□□ -1.8
CLDN18P56856 AL161631.1-201ENST00000417933 486 ntBASIC3.78□□□□□ -1.8
CLDN18P56856 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN18P56856 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.78□□□□□ -1.8
CLDN18P56856 MTCO1P52-201ENST00000433928 531 ntBASIC3.78□□□□□ -1.8
CLDN18P56856 MED6P1-201ENST00000439659 713 ntBASIC3.78□□□□□ -1.8
CLDN18P56856 RPL34P26-201ENST00000445636 354 ntBASIC3.78□□□□□ -1.8
CLDN18P56856 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN18P56856 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.78□□□□□ -1.8
CLDN18P56856 RNA5SP246-201ENST00000458909 119 ntBASIC3.78□□□□□ -1.8
CLDN18P56856 RPS7P7-201ENST00000463499 571 ntBASIC3.78□□□□□ -1.8
CLDN18P56856 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN18P56856 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN18P56856 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN18P56856 OR4A2P-201ENST00000527276 913 ntBASIC3.78□□□□□ -1.8
CLDN18P56856 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN18P56856 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN18P56856 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN18P56856 AC007224.1-201ENST00000564410 144 ntBASIC3.78□□□□□ -1.8
CLDN18P56856 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.78□□□□□ -1.8
CLDN18P56856 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN18P56856 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN18P56856 PCNAP1-202ENST00000595299 752 ntBASIC3.78□□□□□ -1.8
CLDN18P56856 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN18P56856 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN18P56856 AC115621.1-201ENST00000604653 858 ntBASIC3.78□□□□□ -1.8
CLDN18P56856 AC010680.4-201ENST00000605334 543 ntBASIC3.78□□□□□ -1.8
CLDN18P56856 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN18P56856 AL645927.2-201ENST00000618350 349 ntBASIC3.78□□□□□ -1.8
CLDN18P56856 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN18P56856 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
CLDN18P56856 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CLDN18P56856 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN18P56856 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN18P56856 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
CLDN18P56856 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN18P56856 SAGE2P-201ENST00000420011 2126 ntBASIC3.77□□□□□ -1.81
CLDN18P56856 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CLDN18P56856 AC105074.1-201ENST00000623380 3095 ntBASIC3.77□□□□□ -1.81
CLDN18P56856 DCAF13P3-201ENST00000561147 1334 ntBASIC3.77□□□□□ -1.81
CLDN18P56856 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN18P56856 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN18P56856 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN18P56856 RNU1-108P-201ENST00000362556 161 ntBASIC3.77□□□□□ -1.81
CLDN18P56856 RNU1-13P-201ENST00000384499 162 ntBASIC3.77□□□□□ -1.81
CLDN18P56856 HDGFP1-201ENST00000405943 252 ntBASIC3.77□□□□□ -1.81
CLDN18P56856 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN18P56856 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.77□□□□□ -1.81
CLDN18P56856 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN18P56856 SKP1P3-201ENST00000429280 487 ntBASIC3.77□□□□□ -1.81
CLDN18P56856 MRPL50P1-201ENST00000431951 384 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms