Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 MTCO3P31-201ENST00000405526 789 ntBASIC4.76□□□□□ -1.65
NR1H2P55055 AL390316.1-201ENST00000406279 553 ntBASIC4.76□□□□□ -1.65
NR1H2P55055 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.76□□□□□ -1.65
NR1H2P55055 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.76□□□□□ -1.65
NR1H2P55055 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.76□□□□□ -1.65
NR1H2P55055 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.76□□□□□ -1.65
NR1H2P55055 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.76□□□□□ -1.65
NR1H2P55055 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.76□□□□□ -1.65
NR1H2P55055 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.76□□□□□ -1.65
NR1H2P55055 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
NR1H2P55055 ZNF886P-201ENST00000450781 723 ntBASIC4.76□□□□□ -1.65
NR1H2P55055 PTGES3P5-201ENST00000455109 434 ntBASIC4.76□□□□□ -1.65
NR1H2P55055 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.76□□□□□ -1.65
NR1H2P55055 AL139824.2-201ENST00000458731 1095 ntBASIC4.76□□□□□ -1.65
NR1H2P55055 RPL23AP44-201ENST00000482216 473 ntBASIC4.76□□□□□ -1.65
NR1H2P55055 AC021146.5-201ENST00000503544 545 ntBASIC4.76□□□□□ -1.65
NR1H2P55055 MTND6P2-201ENST00000512226 524 ntBASIC4.76□□□□□ -1.65
NR1H2P55055 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.76□□□□□ -1.65
NR1H2P55055 PTP4A1P6-201ENST00000531034 478 ntBASIC4.76□□□□□ -1.65
NR1H2P55055 OR7E128P-201ENST00000532736 1024 ntBASIC4.76□□□□□ -1.65
NR1H2P55055 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.76□□□□□ -1.65
NR1H2P55055 AC005868.1-201ENST00000536421 331 ntBASIC4.76□□□□□ -1.65
NR1H2P55055 AC126177.5-201ENST00000549599 178 ntBASIC4.76□□□□□ -1.65
NR1H2P55055 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.76□□□□□ -1.65
NR1H2P55055 OR11J2P-201ENST00000555298 907 ntBASIC4.76□□□□□ -1.65
NR1H2P55055 EIF5A2P1-201ENST00000564027 460 ntBASIC4.76□□□□□ -1.65
NR1H2P55055 AC099786.3-201ENST00000565735 1410 ntBASIC4.76□□□□□ -1.65
NR1H2P55055 MTCYBP28-201ENST00000566728 1132 ntBASIC4.76□□□□□ -1.65
NR1H2P55055 MIR4504-201ENST00000577413 92 ntBASIC4.76□□□□□ -1.65
NR1H2P55055 MIR3912-201ENST00000577566 105 ntBASIC4.76□□□□□ -1.65
NR1H2P55055 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.76□□□□□ -1.65
NR1H2P55055 MIR4436B2-201ENST00000581415 91 ntBASIC4.76□□□□□ -1.65
NR1H2P55055 MIR4436B1-201ENST00000583272 91 ntBASIC4.76□□□□□ -1.65
NR1H2P55055 CLIC4P2-201ENST00000601934 717 ntBASIC4.76□□□□□ -1.65
NR1H2P55055 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.76□□□□□ -1.65
NR1H2P55055 AC126915.2-201ENST00000610957 190 ntBASIC4.76□□□□□ -1.65
NR1H2P55055 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.76□□□□□ -1.65
NR1H2P55055 AP006248.2-201ENST00000623309 592 ntBASIC4.76□□□□□ -1.65
NR1H2P55055 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.76□□□□□ -1.65
NR1H2P55055 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NR1H2P55055 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NR1H2P55055 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
NR1H2P55055 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.76□□□□□ -1.65
NR1H2P55055 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
NR1H2P55055 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
NR1H2P55055 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NR1H2P55055 MTND5P31-201ENST00000419366 1374 ntBASIC4.76□□□□□ -1.65
NR1H2P55055 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
NR1H2P55055 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
NR1H2P55055 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NR1H2P55055 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.75□□□□□ -1.65
NR1H2P55055 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
NR1H2P55055 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NR1H2P55055 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NR1H2P55055 RN7SKP103-201ENST00000363848 320 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
NR1H2P55055 AL136310.1-201ENST00000404926 654 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 RNU2-21P-201ENST00000410368 188 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 RNU4-22P-201ENST00000411058 166 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 RPL37P18-201ENST00000411602 243 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 OR4K6P-201ENST00000416478 897 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 RPS15AP40-201ENST00000419621 391 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 AC004448.2-201ENST00000422360 586 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 AC093655.2-201ENST00000425735 631 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 AC096632.1-201ENST00000427395 310 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.75□□□□□ -1.65
NR1H2P55055 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.75□□□□□ -1.65
NR1H2P55055 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 GTF2IP7-202ENST00000436677 309 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 USP9YP22-201ENST00000438971 294 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.75□□□□□ -1.65
NR1H2P55055 AL772161.1-201ENST00000439130 476 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 MTND1P26-201ENST00000440488 538 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 CEACAMP7-201ENST00000444105 496 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 Z80107.2-201ENST00000445127 392 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 AL589880.1-201ENST00000448271 287 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 AL034418.1-201ENST00000448675 860 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.75□□□□□ -1.65
NR1H2P55055 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.75□□□□□ -1.65
NR1H2P55055 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.75□□□□□ -1.65
NR1H2P55055 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.75□□□□□ -1.65
NR1H2P55055 AL035090.1-201ENST00000454835 332 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 NF1P3-201ENST00000457709 450 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 AC079168.1-201ENST00000458741 345 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 AC108161.1-201ENST00000461060 402 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 RN7SL189P-201ENST00000468631 289 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 RN7SL222P-201ENST00000476452 299 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 AC090114.3-201ENST00000479267 829 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 RN7SL817P-201ENST00000480777 288 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.75□□□□□ -1.65
NR1H2P55055 AC231760.1-201ENST00000498002 260 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.75□□□□□ -1.65
NR1H2P55055 AC109471.1-201ENST00000511631 612 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NR1H2P55055 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.75□□□□□ -1.65
NR1H2P55055 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.75□□□□□ -1.65
NR1H2P55055 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NR1H2P55055 MTCYBP27-201ENST00000555160 670 ntBASIC4.75□□□□□ -1.65
NR1H2P55055 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms