Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TM4SF4P48230 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TM4SF4P48230 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.41□□□□□ -1.54
TM4SF4P48230 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TM4SF4P48230 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TM4SF4P48230 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TM4SF4P48230 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TM4SF4P48230 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.41□□□□□ -1.54
TM4SF4P48230 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
TM4SF4P48230 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TM4SF4P48230 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TM4SF4P48230 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TM4SF4P48230 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.4□□□□□ -1.54
TM4SF4P48230 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.4□□□□□ -1.54
TM4SF4P48230 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.54
TM4SF4P48230 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
TM4SF4P48230 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TM4SF4P48230 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TM4SF4P48230 SNORA70.9-201ENST00000384370 135 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TM4SF4P48230 SFR1P1-201ENST00000403720 688 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 AL512430.2-201ENST00000406786 339 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 SNORA11.1-201ENST00000408133 129 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 AL450992.3-201ENST00000413192 568 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 AC009237.10-201ENST00000414112 510 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 AC009237.5-201ENST00000414271 501 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 XKRYP1-201ENST00000423438 492 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.4□□□□□ -1.54
TM4SF4P48230 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.4□□□□□ -1.54
TM4SF4P48230 XKRYP2-201ENST00000432915 492 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 AL132765.1-201ENST00000434165 553 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 AC084290.1-201ENST00000434995 374 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.4□□□□□ -1.54
TM4SF4P48230 BX679664.2-201ENST00000439282 283 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 RPL23AP93-201ENST00000440847 484 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.4□□□□□ -1.54
TM4SF4P48230 RPL7AP61-201ENST00000443410 636 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 ELOCP13-201ENST00000443934 329 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.4□□□□□ -1.54
TM4SF4P48230 RN7SL197P-201ENST00000466981 299 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 CCDC75P1-201ENST00000469247 791 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 AC104763.1-201ENST00000475274 360 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 AC098862.1-201ENST00000504991 413 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 RFPL4AP5-201ENST00000514977 504 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 RN7SKP287-201ENST00000516546 266 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 RNU6-709P-201ENST00000517257 104 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.4□□□□□ -1.54
TM4SF4P48230 OR8Q1P-201ENST00000526467 655 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.4□□□□□ -1.54
TM4SF4P48230 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.4□□□□□ -1.54
TM4SF4P48230 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.4□□□□□ -1.54
TM4SF4P48230 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.4□□□□□ -1.54
TM4SF4P48230 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.4□□□□□ -1.54
TM4SF4P48230 AC022884.2-201ENST00000578535 580 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 MIR4666A-201ENST00000580160 79 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 VN1R83P-201ENST00000595685 445 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.4□□□□□ -1.54
TM4SF4P48230 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.4□□□□□ -1.54
TM4SF4P48230 AC024220.1-201ENST00000603675 484 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 AC018695.5-201ENST00000605872 315 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 SNX18P1Y-201ENST00000616231 511 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 AC006386.1-201ENST00000619436 415 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 AC112200.1-201ENST00000625015 234 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TM4SF4P48230 MFSD8-245ENST00000641743 948 ntBASIC5.4□□□□□ -1.54
TM4SF4P48230 A2MP1-204ENST00000566278 4130 ntBASIC5.4□□□□□ -1.55
TM4SF4P48230 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
TM4SF4P48230 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TM4SF4P48230 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TM4SF4P48230 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.4□□□□□ -1.55
TM4SF4P48230 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TM4SF4P48230 SEPT7P7-201ENST00000420492 1301 ntBASIC5.4□□□□□ -1.55
TM4SF4P48230 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TM4SF4P48230 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.39□□□□□ -1.55
TM4SF4P48230 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
TM4SF4P48230 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TM4SF4P48230 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TM4SF4P48230 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TM4SF4P48230 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TM4SF4P48230 MAPK10-328ENST00000641553 4009 ntBASIC5.39□□□□□ -1.55
TM4SF4P48230 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TM4SF4P48230 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TM4SF4P48230 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.39□□□□□ -1.55
TM4SF4P48230 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TM4SF4P48230 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TM4SF4P48230 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.39□□□□□ -1.55
TM4SF4P48230 MIR659-201ENST00000384963 97 ntBASIC5.39□□□□□ -1.55
TM4SF4P48230 SNORA68.2-201ENST00000391263 128 ntBASIC5.39□□□□□ -1.55
TM4SF4P48230 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TM4SF4P48230 AL590762.2-201ENST00000395798 571 ntBASIC5.39□□□□□ -1.55
TM4SF4P48230 SDHCP2-201ENST00000398565 501 ntBASIC5.39□□□□□ -1.55
TM4SF4P48230 Z98745.1-201ENST00000402553 494 ntBASIC5.39□□□□□ -1.55
TM4SF4P48230 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.39□□□□□ -1.55
TM4SF4P48230 HMGB1P49-201ENST00000418882 569 ntBASIC5.39□□□□□ -1.55
TM4SF4P48230 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.39□□□□□ -1.55
TM4SF4P48230 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.39□□□□□ -1.55
TM4SF4P48230 AC011998.1-201ENST00000433403 117 ntBASIC5.39□□□□□ -1.55
TM4SF4P48230 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.39□□□□□ -1.55
TM4SF4P48230 RPL12P46-201ENST00000436610 195 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms