Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AP002812.1-201ENST00000495378 474 ntBASIC5.56□□□□□ -1.52
COL15A1P39059 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.56□□□□□ -1.52
COL15A1P39059 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.56□□□□□ -1.52
COL15A1P39059 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.56□□□□□ -1.52
COL15A1P39059 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.56□□□□□ -1.52
COL15A1P39059 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.56□□□□□ -1.52
COL15A1P39059 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.56□□□□□ -1.52
COL15A1P39059 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL15A1P39059 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.56□□□□□ -1.52
COL15A1P39059 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.56□□□□□ -1.52
COL15A1P39059 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.56□□□□□ -1.52
COL15A1P39059 RPL23AP97-201ENST00000568955 471 ntBASIC5.56□□□□□ -1.52
COL15A1P39059 AC022022.2-201ENST00000602989 360 ntBASIC5.56□□□□□ -1.52
COL15A1P39059 RNU4-5P-201ENST00000607255 135 ntBASIC5.56□□□□□ -1.52
COL15A1P39059 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.56□□□□□ -1.52
COL15A1P39059 AC234782.5-201ENST00000617723 324 ntBASIC5.56□□□□□ -1.52
COL15A1P39059 AL445363.3-201ENST00000623080 671 ntBASIC5.56□□□□□ -1.52
COL15A1P39059 AC138965.3-201ENST00000623875 498 ntBASIC5.56□□□□□ -1.52
COL15A1P39059 AP000676.4-201ENST00000624659 623 ntBASIC5.56□□□□□ -1.52
COL15A1P39059 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.56□□□□□ -1.52
COL15A1P39059 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
COL15A1P39059 RLIMP2-201ENST00000427891 1563 ntBASIC5.56□□□□□ -1.52
COL15A1P39059 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.56□□□□□ -1.52
COL15A1P39059 AC017104.4-201ENST00000636283 1592 ntBASIC5.56□□□□□ -1.52
COL15A1P39059 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL15A1P39059 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL15A1P39059 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL15A1P39059 AC104260.2-201ENST00000623551 3497 ntBASIC5.56□□□□□ -1.52
COL15A1P39059 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
COL15A1P39059 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL15A1P39059 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
COL15A1P39059 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL15A1P39059 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
COL15A1P39059 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL15A1P39059 AC107068.1-201ENST00000563286 4218 ntBASIC5.56□□□□□ -1.52
COL15A1P39059 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
COL15A1P39059 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL15A1P39059 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL15A1P39059 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL15A1P39059 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
COL15A1P39059 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
COL15A1P39059 RNA5SP307-201ENST00000362863 116 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 RNU5B-1-201ENST00000363286 116 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
COL15A1P39059 U6.112-201ENST00000384129 70 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 MT-TP-201ENST00000387461 68 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 RNA5SP171-201ENST00000391071 115 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.55□□□□□ -1.52
COL15A1P39059 HMGB1P13-201ENST00000406019 642 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 RN7SKP167-201ENST00000411047 285 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 VDAC1P9-201ENST00000412766 841 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.55□□□□□ -1.52
COL15A1P39059 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.55□□□□□ -1.52
COL15A1P39059 FO393419.3-201ENST00000428741 282 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 AL591719.1-201ENST00000444669 744 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.55□□□□□ -1.52
COL15A1P39059 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.55□□□□□ -1.52
COL15A1P39059 AC096992.1-201ENST00000459808 709 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.55□□□□□ -1.52
COL15A1P39059 CDH12P2-201ENST00000504393 298 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 AP001207.2-201ENST00000519490 539 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 HIGD1AP18-201ENST00000520730 278 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 OR10V3P-201ENST00000525712 725 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL15A1P39059 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL15A1P39059 AC011611.5-201ENST00000552477 578 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 TVP23BP1-201ENST00000557500 617 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.55□□□□□ -1.52
COL15A1P39059 AC122134.1-201ENST00000565664 1104 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 MIR4789-201ENST00000577469 82 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.55□□□□□ -1.52
COL15A1P39059 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.55□□□□□ -1.52
COL15A1P39059 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.55□□□□□ -1.52
COL15A1P39059 AC097505.1-201ENST00000610199 565 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
COL15A1P39059 AC022106.2-201ENST00000620114 757 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 AC006963.1-201ENST00000624003 1052 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL15A1P39059 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.55□□□□□ -1.52
COL15A1P39059 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL15A1P39059 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.55□□□□□ -1.52
COL15A1P39059 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
COL15A1P39059 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
COL15A1P39059 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.55□□□□□ -1.52
COL15A1P39059 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL15A1P39059 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.55□□□□□ -1.52
COL15A1P39059 AC006484.1-201ENST00000435086 1884 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.55□□□□□ -1.52
COL15A1P39059 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
COL15A1P39059 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.55□□□□□ -1.52
COL15A1P39059 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL15A1P39059 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL15A1P39059 RNU1-63P-201ENST00000383902 164 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 TAS2R15P-201ENST00000390674 928 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 AC097374.1-203ENST00000400783 485 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 CYCSP19-201ENST00000411715 316 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 OSTCP5-201ENST00000425293 453 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 CDY14P-201ENST00000431260 1014 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 HMGB3P10-201ENST00000434734 572 ntBASIC5.55□□□□□ -1.52
COL15A1P39059 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms