Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CPS1P31327 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CPS1P31327 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CPS1P31327 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CPS1P31327 SNORA3C-201ENST00000408792 125 ntBASIC5.38□□□□□ -1.55
CPS1P31327 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CPS1P31327 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.38□□□□□ -1.55
CPS1P31327 AC233982.1-201ENST00000451247 436 ntBASIC5.38□□□□□ -1.55
CPS1P31327 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.38□□□□□ -1.55
CPS1P31327 UBDP1-202ENST00000457888 382 ntBASIC5.38□□□□□ -1.55
CPS1P31327 RPL21P10-201ENST00000463521 490 ntBASIC5.38□□□□□ -1.55
CPS1P31327 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CPS1P31327 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CPS1P31327 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CPS1P31327 NCAPGP2-201ENST00000557911 754 ntBASIC5.38□□□□□ -1.55
CPS1P31327 AC084759.1-201ENST00000561168 290 ntBASIC5.38□□□□□ -1.55
CPS1P31327 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.38□□□□□ -1.55
CPS1P31327 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CPS1P31327 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CPS1P31327 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CPS1P31327 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
CPS1P31327 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CPS1P31327 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CPS1P31327 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.37□□□□□ -1.55
CPS1P31327 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.37□□□□□ -1.55
CPS1P31327 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CPS1P31327 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CPS1P31327 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CPS1P31327 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
CPS1P31327 SAMMSON-213ENST00000641336 1521 ntBASIC5.37□□□□□ -1.55
CPS1P31327 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CPS1P31327 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.37□□□□□ -1.55
CPS1P31327 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CPS1P31327 ANKRD36P1-201ENST00000344424 659 ntBASIC5.37□□□□□ -1.55
CPS1P31327 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.37□□□□□ -1.55
CPS1P31327 DYNLL1P7-201ENST00000429273 258 ntBASIC5.37□□□□□ -1.55
CPS1P31327 RANP8-201ENST00000444720 713 ntBASIC5.37□□□□□ -1.55
CPS1P31327 RSL24D1P3-201ENST00000449255 495 ntBASIC5.37□□□□□ -1.55
CPS1P31327 AC037198.2-201ENST00000478845 733 ntBASIC5.37□□□□□ -1.55
CPS1P31327 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.37□□□□□ -1.55
CPS1P31327 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.37□□□□□ -1.55
CPS1P31327 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.37□□□□□ -1.55
CPS1P31327 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.37□□□□□ -1.55
CPS1P31327 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.37□□□□□ -1.55
CPS1P31327 AC009303.3-201ENST00000591103 736 ntBASIC5.37□□□□□ -1.55
CPS1P31327 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.37□□□□□ -1.55
CPS1P31327 AC083843.2-201ENST00000568248 6253 ntBASIC5.37□□□□□ -1.55
CPS1P31327 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CPS1P31327 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.37□□□□□ -1.55
CPS1P31327 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CPS1P31327 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CPS1P31327 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CPS1P31327 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
CPS1P31327 U3.19-201ENST00000390893 196 ntBASIC5.36□□□□□ -1.55
CPS1P31327 AC093719.1-202ENST00000392735 373 ntBASIC5.36□□□□□ -1.55
CPS1P31327 AL139095.1-201ENST00000404326 391 ntBASIC5.36□□□□□ -1.55
CPS1P31327 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.36□□□□□ -1.55
CPS1P31327 SETD6P1-201ENST00000444575 317 ntBASIC5.36□□□□□ -1.55
CPS1P31327 IGHV3-32-201ENST00000519182 355 ntBASIC5.36□□□□□ -1.55
CPS1P31327 AC103843.2-201ENST00000530523 682 ntBASIC5.36□□□□□ -1.55
CPS1P31327 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.36□□□□□ -1.55
CPS1P31327 AC034105.3-201ENST00000565294 442 ntBASIC5.36□□□□□ -1.55
CPS1P31327 AC068790.5-201ENST00000602741 355 ntBASIC5.36□□□□□ -1.55
CPS1P31327 AC125494.3-201ENST00000602759 455 ntBASIC5.36□□□□□ -1.55
CPS1P31327 AL157762.1-201ENST00000619612 415 ntBASIC5.36□□□□□ -1.55
CPS1P31327 AC095038.2-201ENST00000621464 1070 ntBASIC5.36□□□□□ -1.55
CPS1P31327 AL359757.2-201ENST00000624309 274 ntBASIC5.36□□□□□ -1.55
CPS1P31327 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.36□□□□□ -1.55
CPS1P31327 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CPS1P31327 TCP1P3-201ENST00000414406 1498 ntBASIC5.36□□□□□ -1.55
CPS1P31327 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CPS1P31327 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CPS1P31327 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.35□□□□□ -1.55
CPS1P31327 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CPS1P31327 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CPS1P31327 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
CPS1P31327 USP8P1-201ENST00000494673 3183 ntBASIC5.35□□□□□ -1.55
CPS1P31327 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CPS1P31327 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CPS1P31327 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.35□□□□□ -1.55
CPS1P31327 RPL7P60-201ENST00000397636 735 ntBASIC5.35□□□□□ -1.55
CPS1P31327 UBE2V1P2-201ENST00000397758 440 ntBASIC5.35□□□□□ -1.55
CPS1P31327 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.35□□□□□ -1.55
CPS1P31327 UBE2V1P1-201ENST00000430836 445 ntBASIC5.35□□□□□ -1.55
CPS1P31327 AC127537.2-201ENST00000439258 465 ntBASIC5.35□□□□□ -1.55
CPS1P31327 HMGB1P37-201ENST00000439613 609 ntBASIC5.35□□□□□ -1.55
CPS1P31327 BTF3P5-201ENST00000457252 467 ntBASIC5.35□□□□□ -1.55
CPS1P31327 AC096576.1-201ENST00000489014 359 ntBASIC5.35□□□□□ -1.55
CPS1P31327 RANP9-201ENST00000519957 271 ntBASIC5.35□□□□□ -1.55
CPS1P31327 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.35□□□□□ -1.55
CPS1P31327 KC877982.1-201ENST00000602313 470 ntBASIC5.35□□□□□ -1.55
CPS1P31327 MIR7112-201ENST00000616126 65 ntBASIC5.35□□□□□ -1.55
CPS1P31327 BNIP3P41-202ENST00000616656 861 ntBASIC5.35□□□□□ -1.55
CPS1P31327 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.35□□□□□ -1.55
CPS1P31327 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CPS1P31327 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CPS1P31327 MUC2-202ENST00000613187 4845 ntBASIC5.35□□□□□ -1.55
CPS1P31327 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC5.34□□□□□ -1.55
CPS1P31327 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CPS1P31327 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms