Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PTPN6P29350 OR11H5P-202ENST00000641612 1325 ntBASIC4.16□□□□□ -1.74
PTPN6P29350 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.16□□□□□ -1.74
PTPN6P29350 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PTPN6P29350 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
PTPN6P29350 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PTPN6P29350 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
PTPN6P29350 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PTPN6P29350 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.15□□□□□ -1.74
PTPN6P29350 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
PTPN6P29350 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.15□□□□□ -1.74
PTPN6P29350 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
PTPN6P29350 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
PTPN6P29350 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.15□□□□□ -1.74
PTPN6P29350 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PTPN6P29350 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PTPN6P29350 AL137100.1-201ENST00000556703 1620 ntBASIC4.15□□□□□ -1.74
PTPN6P29350 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
PTPN6P29350 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.15□□□□□ -1.75
PTPN6P29350 METTL21EP-201ENST00000298105 713 ntBASIC4.15□□□□□ -1.75
PTPN6P29350 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PTPN6P29350 U3.15-201ENST00000365398 212 ntBASIC4.15□□□□□ -1.75
PTPN6P29350 TCEA1P4-201ENST00000415066 844 ntBASIC4.15□□□□□ -1.75
PTPN6P29350 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.15□□□□□ -1.75
PTPN6P29350 AC023347.2-201ENST00000433994 462 ntBASIC4.15□□□□□ -1.75
PTPN6P29350 RPL7P29-201ENST00000437151 728 ntBASIC4.15□□□□□ -1.75
PTPN6P29350 RPS27P5-201ENST00000444247 244 ntBASIC4.15□□□□□ -1.75
PTPN6P29350 CYCSP42-201ENST00000450823 238 ntBASIC4.15□□□□□ -1.75
PTPN6P29350 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.15□□□□□ -1.75
PTPN6P29350 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.15□□□□□ -1.75
PTPN6P29350 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.15□□□□□ -1.75
PTPN6P29350 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PTPN6P29350 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.15□□□□□ -1.75
PTPN6P29350 PPM1AP1-201ENST00000502740 1135 ntBASIC4.15□□□□□ -1.75
PTPN6P29350 AC025768.1-201ENST00000510057 267 ntBASIC4.15□□□□□ -1.75
PTPN6P29350 MTND2P31-201ENST00000512602 616 ntBASIC4.15□□□□□ -1.75
PTPN6P29350 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.15□□□□□ -1.75
PTPN6P29350 SNORA76.2-201ENST00000517095 137 ntBASIC4.15□□□□□ -1.75
PTPN6P29350 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.15□□□□□ -1.75
PTPN6P29350 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.15□□□□□ -1.75
PTPN6P29350 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.15□□□□□ -1.75
PTPN6P29350 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.15□□□□□ -1.75
PTPN6P29350 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PTPN6P29350 OSBPL9P3-201ENST00000534523 595 ntBASIC4.15□□□□□ -1.75
PTPN6P29350 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.15□□□□□ -1.75
PTPN6P29350 AC083899.3-201ENST00000603413 594 ntBASIC4.15□□□□□ -1.75
PTPN6P29350 AC115286.1-201ENST00000604298 434 ntBASIC4.15□□□□□ -1.75
PTPN6P29350 AC020634.1-201ENST00000608701 549 ntBASIC4.15□□□□□ -1.75
PTPN6P29350 AL158196.1-201ENST00000616786 434 ntBASIC4.15□□□□□ -1.75
PTPN6P29350 AL731566.2-201ENST00000618971 317 ntBASIC4.15□□□□□ -1.75
PTPN6P29350 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.15□□□□□ -1.75
PTPN6P29350 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.15□□□□□ -1.75
PTPN6P29350 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PTPN6P29350 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PTPN6P29350 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
PTPN6P29350 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
PTPN6P29350 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
PTPN6P29350 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PTPN6P29350 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.14□□□□□ -1.75
PTPN6P29350 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTPN6P29350 EIF2AP4-201ENST00000424793 1781 ntBASIC4.14□□□□□ -1.75
PTPN6P29350 AC068254.2-201ENST00000623938 3577 ntBASIC4.14□□□□□ -1.75
PTPN6P29350 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PTPN6P29350 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.14□□□□□ -1.75
PTPN6P29350 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTPN6P29350 RAD17P1-201ENST00000418130 2042 ntBASIC4.14□□□□□ -1.75
PTPN6P29350 AL049737.1-201ENST00000413920 1403 ntBASIC4.14□□□□□ -1.75
PTPN6P29350 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTPN6P29350 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.14□□□□□ -1.75
PTPN6P29350 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTPN6P29350 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.14□□□□□ -1.75
PTPN6P29350 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
PTPN6P29350 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PTPN6P29350 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTPN6P29350 SNORD66.1-201ENST00000391230 76 ntBASIC4.14□□□□□ -1.75
PTPN6P29350 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.14□□□□□ -1.75
PTPN6P29350 AC004022.2-201ENST00000413824 193 ntBASIC4.14□□□□□ -1.75
PTPN6P29350 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.14□□□□□ -1.75
PTPN6P29350 AC234782.4-201ENST00000417646 1048 ntBASIC4.14□□□□□ -1.75
PTPN6P29350 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.14□□□□□ -1.75
PTPN6P29350 AC009480.2-201ENST00000422916 432 ntBASIC4.14□□□□□ -1.75
PTPN6P29350 C4BPAP2-201ENST00000428434 478 ntBASIC4.14□□□□□ -1.75
PTPN6P29350 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.14□□□□□ -1.75
PTPN6P29350 RPS6P12-201ENST00000432491 726 ntBASIC4.14□□□□□ -1.75
PTPN6P29350 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.14□□□□□ -1.75
PTPN6P29350 RPL21P133-201ENST00000443666 476 ntBASIC4.14□□□□□ -1.75
PTPN6P29350 MTND2P28-201ENST00000457540 1044 ntBASIC4.14□□□□□ -1.75
PTPN6P29350 AL161747.1-201ENST00000480068 358 ntBASIC4.14□□□□□ -1.75
PTPN6P29350 AC093267.1-201ENST00000489176 961 ntBASIC4.14□□□□□ -1.75
PTPN6P29350 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.14□□□□□ -1.75
PTPN6P29350 AC010374.1-201ENST00000503762 1237 ntBASIC4.14□□□□□ -1.75
PTPN6P29350 IFITM8P-201ENST00000522529 394 ntBASIC4.14□□□□□ -1.75
PTPN6P29350 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.14□□□□□ -1.75
PTPN6P29350 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PTPN6P29350 MIR4284-201ENST00000578924 81 ntBASIC4.14□□□□□ -1.75
PTPN6P29350 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PTPN6P29350 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.14□□□□□ -1.75
PTPN6P29350 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.14□□□□□ -1.75
PTPN6P29350 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.14□□□□□ -1.75
PTPN6P29350 RPL26P30-202ENST00000602923 645 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms