Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC112484.5-201ENST00000624189 228 ntBASIC5.35□□□□□ -1.55
POLR2AP24928 MIR1322-201ENST00000638013 71 ntBASIC5.35□□□□□ -1.55
POLR2AP24928 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
POLR2AP24928 AL445487.1-201ENST00000415694 1580 ntBASIC5.35□□□□□ -1.55
POLR2AP24928 AL031119.1-201ENST00000404707 1879 ntBASIC5.35□□□□□ -1.55
POLR2AP24928 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.35□□□□□ -1.55
POLR2AP24928 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
POLR2AP24928 AP005432.1-201ENST00000580891 3485 ntBASIC5.35□□□□□ -1.55
POLR2AP24928 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
POLR2AP24928 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.35□□□□□ -1.55
POLR2AP24928 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
POLR2AP24928 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.35□□□□□ -1.55
POLR2AP24928 AL137141.1-201ENST00000624622 4836 ntBASIC5.35□□□□□ -1.55
POLR2AP24928 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
POLR2AP24928 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
POLR2AP24928 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
POLR2AP24928 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
POLR2AP24928 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
POLR2AP24928 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
POLR2AP24928 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
POLR2AP24928 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
POLR2AP24928 RNU6-236P-201ENST00000363886 106 ntBASIC5.35□□□□□ -1.55
POLR2AP24928 ATP5F1P3-201ENST00000397213 657 ntBASIC5.35□□□□□ -1.55
POLR2AP24928 MTCO1P56-201ENST00000401674 224 ntBASIC5.35□□□□□ -1.55
POLR2AP24928 GSTA8P-201ENST00000404253 637 ntBASIC5.35□□□□□ -1.55
POLR2AP24928 RAP1BP3-201ENST00000407180 549 ntBASIC5.35□□□□□ -1.55
POLR2AP24928 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.35□□□□□ -1.55
POLR2AP24928 TBCAP1-201ENST00000436520 327 ntBASIC5.35□□□□□ -1.55
POLR2AP24928 AC009961.3-201ENST00000449832 765 ntBASIC5.35□□□□□ -1.55
POLR2AP24928 NDUFAF4P4-201ENST00000454883 502 ntBASIC5.35□□□□□ -1.55
POLR2AP24928 AC112184.1-201ENST00000505179 312 ntBASIC5.35□□□□□ -1.55
POLR2AP24928 AC112198.1-201ENST00000505369 1220 ntBASIC5.35□□□□□ -1.55
POLR2AP24928 RPL12P22-201ENST00000519073 490 ntBASIC5.35□□□□□ -1.55
POLR2AP24928 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.35□□□□□ -1.55
POLR2AP24928 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
POLR2AP24928 OR8R1P-201ENST00000543943 764 ntBASIC5.35□□□□□ -1.55
POLR2AP24928 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.35□□□□□ -1.55
POLR2AP24928 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.35□□□□□ -1.55
POLR2AP24928 PSMB7P1-201ENST00000556349 514 ntBASIC5.35□□□□□ -1.55
POLR2AP24928 CYCSP40-201ENST00000575927 294 ntBASIC5.35□□□□□ -1.55
POLR2AP24928 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.35□□□□□ -1.55
POLR2AP24928 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.35□□□□□ -1.55
POLR2AP24928 AC008759.1-201ENST00000589783 983 ntBASIC5.35□□□□□ -1.55
POLR2AP24928 BNIP3P30-201ENST00000601184 574 ntBASIC5.35□□□□□ -1.55
POLR2AP24928 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.35□□□□□ -1.55
POLR2AP24928 AP001981.2-201ENST00000603241 418 ntBASIC5.35□□□□□ -1.55
POLR2AP24928 AL354984.3-201ENST00000604803 325 ntBASIC5.35□□□□□ -1.55
POLR2AP24928 AC024060.1-201ENST00000607052 494 ntBASIC5.35□□□□□ -1.55
POLR2AP24928 AC121761.2-201ENST00000617300 689 ntBASIC5.35□□□□□ -1.55
POLR2AP24928 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
POLR2AP24928 AL590240.3-201ENST00000621416 943 ntBASIC5.35□□□□□ -1.55
POLR2AP24928 AL603839.4-201ENST00000624658 1005 ntBASIC5.35□□□□□ -1.55
POLR2AP24928 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.34□□□□□ -1.55
POLR2AP24928 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
POLR2AP24928 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
POLR2AP24928 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
POLR2AP24928 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.34□□□□□ -1.55
POLR2AP24928 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.34□□□□□ -1.55
POLR2AP24928 AL591135.1-201ENST00000401578 5914 ntBASIC5.34□□□□□ -1.55
POLR2AP24928 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
POLR2AP24928 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
POLR2AP24928 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
POLR2AP24928 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
POLR2AP24928 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.34□□□□□ -1.55
POLR2AP24928 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
POLR2AP24928 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
POLR2AP24928 RNU6-560P-201ENST00000364007 108 ntBASIC5.34□□□□□ -1.55
POLR2AP24928 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.34□□□□□ -1.55
POLR2AP24928 RN7SKP202-201ENST00000410439 330 ntBASIC5.34□□□□□ -1.55
POLR2AP24928 RPS21P8-201ENST00000413365 247 ntBASIC5.34□□□□□ -1.55
POLR2AP24928 AL008987.1-201ENST00000415528 237 ntBASIC5.34□□□□□ -1.55
POLR2AP24928 AL136231.1-201ENST00000429407 730 ntBASIC5.34□□□□□ -1.55
POLR2AP24928 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.34□□□□□ -1.55
POLR2AP24928 AL356276.2-201ENST00000435919 558 ntBASIC5.34□□□□□ -1.55
POLR2AP24928 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.34□□□□□ -1.55
POLR2AP24928 H2AFZP5-201ENST00000446960 382 ntBASIC5.34□□□□□ -1.55
POLR2AP24928 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.34□□□□□ -1.55
POLR2AP24928 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.34□□□□□ -1.55
POLR2AP24928 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.34□□□□□ -1.55
POLR2AP24928 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.34□□□□□ -1.55
POLR2AP24928 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.34□□□□□ -1.55
POLR2AP24928 AC008837.1-201ENST00000511513 412 ntBASIC5.34□□□□□ -1.55
POLR2AP24928 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.34□□□□□ -1.55
POLR2AP24928 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.34□□□□□ -1.55
POLR2AP24928 AC087897.1-201ENST00000550134 156 ntBASIC5.34□□□□□ -1.55
POLR2AP24928 RN7SL600P-201ENST00000581811 299 ntBASIC5.34□□□□□ -1.55
POLR2AP24928 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.34□□□□□ -1.55
POLR2AP24928 AP001596.2-201ENST00000608410 312 ntBASIC5.34□□□□□ -1.55
POLR2AP24928 AC092794.1-201ENST00000612734 582 ntBASIC5.34□□□□□ -1.55
POLR2AP24928 AL352984.2-202ENST00000613699 155 ntBASIC5.34□□□□□ -1.55
POLR2AP24928 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
POLR2AP24928 AL359740.1-201ENST00000624340 592 ntBASIC5.34□□□□□ -1.55
POLR2AP24928 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.34□□□□□ -1.55
POLR2AP24928 CDRT1-208ENST00000630868 794 ntBASIC5.34□□□□□ -1.55
POLR2AP24928 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
POLR2AP24928 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
POLR2AP24928 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.34□□□□□ -1.55
POLR2AP24928 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
POLR2AP24928 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
POLR2AP24928 LINC00622-201ENST00000562811 1570 ntBASIC5.34□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms