Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC7.26□□□□□ -1.25
COL9A1P20849 SNORD62.1-201ENST00000362541 86 ntBASIC7.26□□□□□ -1.25
COL9A1P20849 RNU6-212P-201ENST00000362642 104 ntBASIC7.26□□□□□ -1.25
COL9A1P20849 RN7SKP174-201ENST00000363803 330 ntBASIC7.26□□□□□ -1.25
COL9A1P20849 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
COL9A1P20849 RNU6-398P-201ENST00000384143 109 ntBASIC7.26□□□□□ -1.25
COL9A1P20849 AL023807.1-201ENST00000407932 359 ntBASIC7.26□□□□□ -1.25
COL9A1P20849 AC011933.1-201ENST00000413334 321 ntBASIC7.26□□□□□ -1.25
COL9A1P20849 CBX1P4-201ENST00000439415 457 ntBASIC7.26□□□□□ -1.25
COL9A1P20849 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.26□□□□□ -1.25
COL9A1P20849 RPL21P89-201ENST00000444021 467 ntBASIC7.26□□□□□ -1.25
COL9A1P20849 FCF1P4-201ENST00000448326 183 ntBASIC7.26□□□□□ -1.25
COL9A1P20849 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC7.26□□□□□ -1.25
COL9A1P20849 MTCO3P8-201ENST00000453691 755 ntBASIC7.26□□□□□ -1.25
COL9A1P20849 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC7.26□□□□□ -1.25
COL9A1P20849 AC083829.1-201ENST00000503756 657 ntBASIC7.26□□□□□ -1.25
COL9A1P20849 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC7.26□□□□□ -1.25
COL9A1P20849 AL671862.1-201ENST00000515851 349 ntBASIC7.26□□□□□ -1.25
COL9A1P20849 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.26□□□□□ -1.25
COL9A1P20849 AC079600.1-201ENST00000550326 297 ntBASIC7.26□□□□□ -1.25
COL9A1P20849 AL049779.2-201ENST00000553847 315 ntBASIC7.26□□□□□ -1.25
COL9A1P20849 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
COL9A1P20849 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC7.26□□□□□ -1.25
COL9A1P20849 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.26□□□□□ -1.25
COL9A1P20849 MIR5692C1-201ENST00000585309 91 ntBASIC7.26□□□□□ -1.25
COL9A1P20849 AC009955.2-201ENST00000597288 542 ntBASIC7.26□□□□□ -1.25
COL9A1P20849 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.26□□□□□ -1.25
COL9A1P20849 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.26□□□□□ -1.25
COL9A1P20849 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC7.26□□□□□ -1.25
COL9A1P20849 MAPK10-347ENST00000641762 2856 ntBASIC7.26□□□□□ -1.25
COL9A1P20849 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL9A1P20849 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
COL9A1P20849 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL9A1P20849 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.26□□□□□ -1.25
COL9A1P20849 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL9A1P20849 PAH-201ENST00000307000 2466 ntTSL 5 BASIC7.26□□□□□ -1.25
COL9A1P20849 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.26□□□□□ -1.25
COL9A1P20849 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL9A1P20849 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL9A1P20849 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.26□□□□□ -1.25
COL9A1P20849 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
COL9A1P20849 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL9A1P20849 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL9A1P20849 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL9A1P20849 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
COL9A1P20849 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL9A1P20849 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
COL9A1P20849 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL9A1P20849 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL9A1P20849 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
COL9A1P20849 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.25□□□□□ -1.25
COL9A1P20849 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.25□□□□□ -1.25
COL9A1P20849 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC7.25□□□□□ -1.25
COL9A1P20849 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.25□□□□□ -1.25
COL9A1P20849 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.25□□□□□ -1.25
COL9A1P20849 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL9A1P20849 Y_RNA.81-201ENST00000362997 102 ntBASIC7.25□□□□□ -1.25
COL9A1P20849 ADIG-201ENST00000373348 430 ntTSL 2 BASIC7.25□□□□□ -1.25
COL9A1P20849 Y_RNA.539-201ENST00000384635 107 ntBASIC7.25□□□□□ -1.25
COL9A1P20849 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
COL9A1P20849 RNU6-293P-201ENST00000411259 106 ntBASIC7.25□□□□□ -1.25
COL9A1P20849 RNU6-387P-201ENST00000411331 105 ntBASIC7.25□□□□□ -1.25
COL9A1P20849 AC096664.2-201ENST00000411843 406 ntBASIC7.25□□□□□ -1.25
COL9A1P20849 RPS3AP12-201ENST00000443616 753 ntBASIC7.25□□□□□ -1.25
COL9A1P20849 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC7.25□□□□□ -1.25
COL9A1P20849 RPSAP7-201ENST00000456871 885 ntBASIC7.25□□□□□ -1.25
COL9A1P20849 SNX18P26-201ENST00000458433 740 ntBASIC7.25□□□□□ -1.25
COL9A1P20849 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC7.25□□□□□ -1.25
COL9A1P20849 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC7.25□□□□□ -1.25
COL9A1P20849 AC098583.1-201ENST00000480875 255 ntBASIC7.25□□□□□ -1.25
COL9A1P20849 AC104806.1-201ENST00000508720 308 ntBASIC7.25□□□□□ -1.25
COL9A1P20849 IL7R-208ENST00000511982 612 ntTSL 2 BASIC7.25□□□□□ -1.25
COL9A1P20849 RNU4-71P-201ENST00000516258 113 ntBASIC7.25□□□□□ -1.25
COL9A1P20849 RN7SKP196-201ENST00000516267 345 ntBASIC7.25□□□□□ -1.25
COL9A1P20849 SOD1P3-201ENST00000518682 454 ntBASIC7.25□□□□□ -1.25
COL9A1P20849 AC100784.1-201ENST00000522790 310 ntBASIC7.25□□□□□ -1.25
COL9A1P20849 RPA2P3-201ENST00000533268 770 ntBASIC7.25□□□□□ -1.25
COL9A1P20849 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC7.25□□□□□ -1.25
COL9A1P20849 SARNP-203ENST00000552080 726 ntTSL 2 BASIC7.25□□□□□ -1.25
COL9A1P20849 LSM6P2-201ENST00000552208 177 ntBASIC7.25□□□□□ -1.25
COL9A1P20849 EEF1B2P1-201ENST00000567221 672 ntBASIC7.25□□□□□ -1.25
COL9A1P20849 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC7.25□□□□□ -1.25
COL9A1P20849 AC012175.1-201ENST00000603755 531 ntBASIC7.25□□□□□ -1.25
COL9A1P20849 RAC1P9-201ENST00000604990 392 ntBASIC7.25□□□□□ -1.25
COL9A1P20849 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC7.25□□□□□ -1.25
COL9A1P20849 AL353662.3-201ENST00000625131 237 ntBASIC7.25□□□□□ -1.25
COL9A1P20849 NLRP9P1-201ENST00000540920 2655 ntBASIC7.25□□□□□ -1.25
COL9A1P20849 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL9A1P20849 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL9A1P20849 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL9A1P20849 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL9A1P20849 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL9A1P20849 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL9A1P20849 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL9A1P20849 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL9A1P20849 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL9A1P20849 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL9A1P20849 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL9A1P20849 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL9A1P20849 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms