Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
APOBP04114 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
APOBP04114 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
APOBP04114 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC2.27□□□□□ -2.05
APOBP04114 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
APOBP04114 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC2.27□□□□□ -2.05
APOBP04114 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC2.27□□□□□ -2.05
APOBP04114 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
APOBP04114 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC2.27□□□□□ -2.05
APOBP04114 RPL23AP89-201ENST00000439324 255 ntBASIC2.27□□□□□ -2.05
APOBP04114 RNU1-41P-201ENST00000516161 162 ntBASIC2.27□□□□□ -2.05
APOBP04114 RNU1-48P-201ENST00000516400 162 ntBASIC2.27□□□□□ -2.05
APOBP04114 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.27□□□□□ -2.05
APOBP04114 AC002069.2-201ENST00000603580 883 ntBASIC2.27□□□□□ -2.05
APOBP04114 5S_rRNA.16-201ENST00000612928 119 ntBASIC2.27□□□□□ -2.05
APOBP04114 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC2.27□□□□□ -2.05
APOBP04114 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
APOBP04114 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
APOBP04114 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
APOBP04114 OTUD4P1-201ENST00000237841 3067 ntBASIC2.27□□□□□ -2.05
APOBP04114 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
APOBP04114 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
APOBP04114 FRG1CP-201ENST00000358464 769 ntBASIC2.27□□□□□ -2.05
APOBP04114 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.27□□□□□ -2.05
APOBP04114 AC108938.1-201ENST00000451204 136 ntBASIC2.27□□□□□ -2.05
APOBP04114 OR7E13P-201ENST00000526052 910 ntBASIC2.27□□□□□ -2.05
APOBP04114 Xist_exon4.1-201ENST00000615964 126 ntBASIC2.27□□□□□ -2.05
APOBP04114 AC010480.1-201ENST00000624823 684 ntBASIC2.27□□□□□ -2.05
APOBP04114 AC011503.2-201ENST00000594230 1500 ntBASIC2.26□□□□□ -2.05
APOBP04114 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.26□□□□□ -2.05
APOBP04114 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.26□□□□□ -2.05
APOBP04114 AC138938.1-201ENST00000515431 782 ntBASIC2.26□□□□□ -2.05
APOBP04114 SNORA70.17-201ENST00000516449 133 ntBASIC2.26□□□□□ -2.05
APOBP04114 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC2.26□□□□□ -2.05
APOBP04114 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC2.26□□□□□ -2.05
APOBP04114 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC2.26□□□□□ -2.05
APOBP04114 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.26□□□□□ -2.05
APOBP04114 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC2.26□□□□□ -2.05
APOBP04114 BCORP1-203ENST00000513194 5093 ntBASIC2.26□□□□□ -2.05
APOBP04114 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
APOBP04114 BCLAF1P2-201ENST00000624956 2609 ntBASIC2.26□□□□□ -2.05
APOBP04114 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC2.26□□□□□ -2.05
APOBP04114 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC2.26□□□□□ -2.05
APOBP04114 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
APOBP04114 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.26□□□□□ -2.05
APOBP04114 GEMIN8P3-201ENST00000445417 720 ntBASIC2.26□□□□□ -2.05
APOBP04114 RFPL4AP5-201ENST00000514977 504 ntBASIC2.26□□□□□ -2.05
APOBP04114 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
APOBP04114 IGKV2OR2-8-201ENST00000558710 300 ntBASIC2.26□□□□□ -2.05
APOBP04114 MIR3936-201ENST00000584304 110 ntBASIC2.26□□□□□ -2.05
APOBP04114 AC026979.4-201ENST00000606555 645 ntBASIC2.26□□□□□ -2.05
APOBP04114 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC2.26□□□□□ -2.05
APOBP04114 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
APOBP04114 ZNF807-201ENST00000328088 1707 ntBASIC2.26□□□□□ -2.05
APOBP04114 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
APOBP04114 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
APOBP04114 DYNLL1P7-201ENST00000429273 258 ntBASIC2.26□□□□□ -2.05
APOBP04114 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC2.26□□□□□ -2.05
APOBP04114 AC008011.1-201ENST00000545989 227 ntBASIC2.26□□□□□ -2.05
APOBP04114 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.26□□□□□ -2.05
APOBP04114 AP003355.3-201ENST00000623465 114 ntBASIC2.26□□□□□ -2.05
APOBP04114 AL392088.2-201ENST00000637607 285 ntBASIC2.26□□□□□ -2.05
APOBP04114 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.26□□□□□ -2.05
APOBP04114 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC2.26□□□□□ -2.05
APOBP04114 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
APOBP04114 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC2.26□□□□□ -2.05
APOBP04114 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
APOBP04114 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC2.26□□□□□ -2.05
APOBP04114 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC2.26□□□□□ -2.05
APOBP04114 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
APOBP04114 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
APOBP04114 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
APOBP04114 RNA5SP50-201ENST00000363731 107 ntBASIC2.25□□□□□ -2.05
APOBP04114 AC073335.1-201ENST00000427776 363 ntBASIC2.25□□□□□ -2.05
APOBP04114 RN7SKP46-201ENST00000515942 234 ntBASIC2.25□□□□□ -2.05
APOBP04114 RNU6-579P-201ENST00000516879 102 ntBASIC2.25□□□□□ -2.05
APOBP04114 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC2.25□□□□□ -2.05
APOBP04114 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
APOBP04114 MAPK10-320ENST00000641462 6696 ntBASIC2.25□□□□□ -2.05
APOBP04114 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
APOBP04114 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
APOBP04114 CRP-203ENST00000368111 512 ntTSL 3 BASIC2.25□□□□□ -2.05
APOBP04114 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC2.25□□□□□ -2.05
APOBP04114 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
APOBP04114 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC2.25□□□□□ -2.05
APOBP04114 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.25□□□□□ -2.05
APOBP04114 AC015871.5-202ENST00000623252 701 ntBASIC2.25□□□□□ -2.05
APOBP04114 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.25□□□□□ -2.05
APOBP04114 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
APOBP04114 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
APOBP04114 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
APOBP04114 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC2.25□□□□□ -2.05
APOBP04114 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
APOBP04114 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
APOBP04114 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
APOBP04114 RNU4-82P-201ENST00000362443 140 ntBASIC2.25□□□□□ -2.05
APOBP04114 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC2.25□□□□□ -2.05
APOBP04114 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC2.25□□□□□ -2.05
APOBP04114 TPT1P1-201ENST00000458495 518 ntBASIC2.25□□□□□ -2.05
APOBP04114 RPL32P34-201ENST00000486380 400 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms