Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.51□□□□□ -1.85
SPTA1P02549 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
SPTA1P02549 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SPTA1P02549 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
SPTA1P02549 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC3.5□□□□□ -1.85
SPTA1P02549 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.5□□□□□ -1.85
SPTA1P02549 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SPTA1P02549 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SPTA1P02549 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SPTA1P02549 AC007066.1-201ENST00000392902 381 ntBASIC3.5□□□□□ -1.85
SPTA1P02549 RN7SKP222-201ENST00000410651 315 ntBASIC3.5□□□□□ -1.85
SPTA1P02549 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.5□□□□□ -1.85
SPTA1P02549 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.5□□□□□ -1.85
SPTA1P02549 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.5□□□□□ -1.85
SPTA1P02549 BMS1P21-201ENST00000634565 365 ntBASIC3.5□□□□□ -1.85
SPTA1P02549 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC3.5□□□□□ -1.85
SPTA1P02549 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.5□□□□□ -1.85
SPTA1P02549 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
SPTA1P02549 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
SPTA1P02549 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SPTA1P02549 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SPTA1P02549 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SPTA1P02549 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SPTA1P02549 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.5□□□□□ -1.85
SPTA1P02549 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
SPTA1P02549 AC068254.2-201ENST00000623938 3577 ntBASIC3.5□□□□□ -1.85
SPTA1P02549 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SPTA1P02549 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SPTA1P02549 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.5□□□□□ -1.85
SPTA1P02549 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC3.5□□□□□ -1.85
SPTA1P02549 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC3.5□□□□□ -1.85
SPTA1P02549 RPS4XP4-201ENST00000443195 763 ntBASIC3.5□□□□□ -1.85
SPTA1P02549 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.5□□□□□ -1.85
SPTA1P02549 BNIP3P41-201ENST00000503774 571 ntBASIC3.5□□□□□ -1.85
SPTA1P02549 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC3.5□□□□□ -1.85
SPTA1P02549 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.5□□□□□ -1.85
SPTA1P02549 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SPTA1P02549 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.5□□□□□ -1.85
SPTA1P02549 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.5□□□□□ -1.85
SPTA1P02549 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.5□□□□□ -1.85
SPTA1P02549 AC104662.1-201ENST00000604448 511 ntBASIC3.5□□□□□ -1.85
SPTA1P02549 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SPTA1P02549 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
SPTA1P02549 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
SPTA1P02549 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SPTA1P02549 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SPTA1P02549 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SPTA1P02549 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.49□□□□□ -1.85
SPTA1P02549 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SPTA1P02549 AL121878.1-201ENST00000418638 859 ntBASIC3.49□□□□□ -1.85
SPTA1P02549 COTL1P1-201ENST00000422309 375 ntBASIC3.49□□□□□ -1.85
SPTA1P02549 RNF19BPX-201ENST00000426224 625 ntBASIC3.49□□□□□ -1.85
SPTA1P02549 AC073335.1-201ENST00000427776 363 ntBASIC3.49□□□□□ -1.85
SPTA1P02549 AC017083.1-201ENST00000428093 483 ntBASIC3.49□□□□□ -1.85
SPTA1P02549 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.49□□□□□ -1.85
SPTA1P02549 RBMY2UP-201ENST00000453474 324 ntBASIC3.49□□□□□ -1.85
SPTA1P02549 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.49□□□□□ -1.85
SPTA1P02549 STMN1P2-201ENST00000508435 439 ntBASIC3.49□□□□□ -1.85
SPTA1P02549 AC023141.12-201ENST00000512399 199 ntBASIC3.49□□□□□ -1.85
SPTA1P02549 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC3.49□□□□□ -1.85
SPTA1P02549 AC069240.1-201ENST00000548774 375 ntBASIC3.49□□□□□ -1.85
SPTA1P02549 EIF5A2P1-201ENST00000564027 460 ntBASIC3.49□□□□□ -1.85
SPTA1P02549 AL049844.2-201ENST00000604280 628 ntBASIC3.49□□□□□ -1.85
SPTA1P02549 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SPTA1P02549 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC3.49□□□□□ -1.85
SPTA1P02549 AC068870.3-201ENST00000625077 2536 ntBASIC3.49□□□□□ -1.85
SPTA1P02549 LINC01355-201ENST00000566551 5444 ntBASIC3.49□□□□□ -1.85
SPTA1P02549 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SPTA1P02549 OTUD4P1-201ENST00000237841 3067 ntBASIC3.49□□□□□ -1.85
SPTA1P02549 GNG5P1-201ENST00000255500 204 ntBASIC3.49□□□□□ -1.85
SPTA1P02549 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SPTA1P02549 AC009506.2-201ENST00000420635 840 ntBASIC3.49□□□□□ -1.85
SPTA1P02549 FABP3P2-201ENST00000453169 399 ntBASIC3.49□□□□□ -1.85
SPTA1P02549 AC007458.1-201ENST00000542812 373 ntBASIC3.49□□□□□ -1.85
SPTA1P02549 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.49□□□□□ -1.85
SPTA1P02549 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.49□□□□□ -1.85
SPTA1P02549 AC007998.5-201ENST00000622938 237 ntBASIC3.49□□□□□ -1.85
SPTA1P02549 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC3.48□□□□□ -1.85
SPTA1P02549 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SPTA1P02549 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.48□□□□□ -1.85
SPTA1P02549 OR56B2P-201ENST00000317102 954 ntBASIC3.48□□□□□ -1.85
SPTA1P02549 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.48□□□□□ -1.85
SPTA1P02549 Z74696.2-201ENST00000436514 498 ntBASIC3.48□□□□□ -1.85
SPTA1P02549 HMGB1P37-201ENST00000439613 609 ntBASIC3.48□□□□□ -1.85
SPTA1P02549 AC010342.1-201ENST00000514047 877 ntBASIC3.48□□□□□ -1.85
SPTA1P02549 RNA5SP303-201ENST00000516192 130 ntBASIC3.48□□□□□ -1.85
SPTA1P02549 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.48□□□□□ -1.85
SPTA1P02549 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.48□□□□□ -1.85
SPTA1P02549 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.48□□□□□ -1.85
SPTA1P02549 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SPTA1P02549 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.48□□□□□ -1.85
SPTA1P02549 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
SPTA1P02549 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
SPTA1P02549 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SPTA1P02549 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.48□□□□□ -1.85
SPTA1P02549 RNU6-7-201ENST00000364784 107 ntBASIC3.48□□□□□ -1.85
SPTA1P02549 RNU6-8-201ENST00000365467 107 ntBASIC3.48□□□□□ -1.85
SPTA1P02549 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SPTA1P02549 RPS29P4-201ENST00000414733 161 ntBASIC3.48□□□□□ -1.85
SPTA1P02549 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms