Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
PDGFBP01127 AL353743.4-201ENST00000422653 1547 ntBASIC4.46□□□□□ -1.7
PDGFBP01127 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PDGFBP01127 AL139811.1-201ENST00000424779 2299 ntBASIC4.46□□□□□ -1.7
PDGFBP01127 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PDGFBP01127 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
PDGFBP01127 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDGFBP01127 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDGFBP01127 AC007390.2-201ENST00000606229 3803 ntBASIC4.45□□□□□ -1.7
PDGFBP01127 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.45□□□□□ -1.7
PDGFBP01127 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDGFBP01127 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PDGFBP01127 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PDGFBP01127 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PDGFBP01127 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDGFBP01127 METTL21EP-201ENST00000298105 713 ntBASIC4.45□□□□□ -1.7
PDGFBP01127 RNU6-984P-201ENST00000363236 109 ntBASIC4.45□□□□□ -1.7
PDGFBP01127 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PDGFBP01127 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.45□□□□□ -1.7
PDGFBP01127 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PDGFBP01127 AL590704.1-201ENST00000402856 794 ntBASIC4.45□□□□□ -1.7
PDGFBP01127 RNA5SP36-201ENST00000410197 133 ntBASIC4.45□□□□□ -1.7
PDGFBP01127 CTSL3P-202ENST00000412179 788 ntBASIC4.45□□□□□ -1.7
PDGFBP01127 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.45□□□□□ -1.7
PDGFBP01127 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.45□□□□□ -1.7
PDGFBP01127 FO393419.3-201ENST00000428741 282 ntBASIC4.45□□□□□ -1.7
PDGFBP01127 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.45□□□□□ -1.7
PDGFBP01127 MTND4P15-201ENST00000437913 1033 ntBASIC4.45□□□□□ -1.7
PDGFBP01127 AL353093.1-201ENST00000441292 436 ntBASIC4.45□□□□□ -1.7
PDGFBP01127 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.45□□□□□ -1.7
PDGFBP01127 RPS15AP29-201ENST00000445539 400 ntBASIC4.45□□□□□ -1.7
PDGFBP01127 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.45□□□□□ -1.7
PDGFBP01127 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.45□□□□□ -1.7
PDGFBP01127 CABYRP1-201ENST00000465493 1045 ntBASIC4.45□□□□□ -1.7
PDGFBP01127 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.45□□□□□ -1.7
PDGFBP01127 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.45□□□□□ -1.7
PDGFBP01127 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.45□□□□□ -1.7
PDGFBP01127 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.45□□□□□ -1.7
PDGFBP01127 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.45□□□□□ -1.7
PDGFBP01127 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.45□□□□□ -1.7
PDGFBP01127 CKS1BP1-201ENST00000555221 240 ntBASIC4.45□□□□□ -1.7
PDGFBP01127 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.45□□□□□ -1.7
PDGFBP01127 MTND4LP24-201ENST00000572277 291 ntBASIC4.45□□□□□ -1.7
PDGFBP01127 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.45□□□□□ -1.7
PDGFBP01127 AC040174.2-201ENST00000602701 465 ntBASIC4.45□□□□□ -1.7
PDGFBP01127 AL606490.9-201ENST00000603331 271 ntBASIC4.45□□□□□ -1.7
PDGFBP01127 AC079587.1-201ENST00000603846 277 ntBASIC4.45□□□□□ -1.7
PDGFBP01127 AC084757.4-201ENST00000616350 526 ntBASIC4.45□□□□□ -1.7
PDGFBP01127 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDGFBP01127 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.45□□□□□ -1.7
PDGFBP01127 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDGFBP01127 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.45□□□□□ -1.7
PDGFBP01127 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.45□□□□□ -1.7
PDGFBP01127 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
PDGFBP01127 AP001002.1-201ENST00000625148 1513 ntBASIC4.45□□□□□ -1.7
PDGFBP01127 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDGFBP01127 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PDGFBP01127 LINC00622-201ENST00000562811 1570 ntBASIC4.44□□□□□ -1.7
PDGFBP01127 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.44□□□□□ -1.7
PDGFBP01127 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PDGFBP01127 OR51H2P-202ENST00000641424 3046 ntBASIC4.44□□□□□ -1.7
PDGFBP01127 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.44□□□□□ -1.7
PDGFBP01127 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.44□□□□□ -1.7
PDGFBP01127 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.44□□□□□ -1.7
PDGFBP01127 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PDGFBP01127 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PDGFBP01127 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PDGFBP01127 MIR3065-201ENST00000390137 79 ntBASIC4.44□□□□□ -1.7
PDGFBP01127 AC097374.1-203ENST00000400783 485 ntBASIC4.44□□□□□ -1.7
PDGFBP01127 TAF9BP2-201ENST00000400856 499 ntBASIC4.44□□□□□ -1.7
PDGFBP01127 RNU2-72P-201ENST00000411175 163 ntBASIC4.44□□□□□ -1.7
PDGFBP01127 RPL30P3-201ENST00000424262 333 ntBASIC4.44□□□□□ -1.7
PDGFBP01127 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.44□□□□□ -1.7
PDGFBP01127 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.44□□□□□ -1.7
PDGFBP01127 AL162388.1-201ENST00000450912 352 ntBASIC4.44□□□□□ -1.7
PDGFBP01127 AC012671.1-201ENST00000451912 203 ntBASIC4.44□□□□□ -1.7
PDGFBP01127 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.44□□□□□ -1.7
PDGFBP01127 RPL37P3-201ENST00000456825 293 ntBASIC4.44□□□□□ -1.7
PDGFBP01127 SNORA31.13-201ENST00000516624 135 ntBASIC4.44□□□□□ -1.7
PDGFBP01127 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PDGFBP01127 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.44□□□□□ -1.7
PDGFBP01127 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.44□□□□□ -1.7
PDGFBP01127 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.44□□□□□ -1.7
PDGFBP01127 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.44□□□□□ -1.7
PDGFBP01127 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.44□□□□□ -1.7
PDGFBP01127 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.44□□□□□ -1.7
PDGFBP01127 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.44□□□□□ -1.7
PDGFBP01127 AL354984.3-201ENST00000604803 325 ntBASIC4.44□□□□□ -1.7
PDGFBP01127 AC079610.2-201ENST00000604818 690 ntBASIC4.44□□□□□ -1.7
PDGFBP01127 RPL21P136-201ENST00000605378 396 ntBASIC4.44□□□□□ -1.7
PDGFBP01127 AL445363.3-201ENST00000623080 671 ntBASIC4.44□□□□□ -1.7
PDGFBP01127 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PDGFBP01127 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.44□□□□□ -1.7
PDGFBP01127 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.44□□□□□ -1.7
PDGFBP01127 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PDGFBP01127 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.44□□□□□ -1.7
PDGFBP01127 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.43□□□□□ -1.7
PDGFBP01127 MFSD8-242ENST00000641690 4199 ntBASIC4.43□□□□□ -1.7
PDGFBP01127 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PDGFBP01127 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms