Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 RNA5SP509-201ENST00000364577 119 ntBASIC3.84□□□□□ -1.79
SCN2BO60939 RNU1-89P-201ENST00000384592 164 ntBASIC3.84□□□□□ -1.79
SCN2BO60939 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SCN2BO60939 AC114814.2-201ENST00000419195 485 ntBASIC3.84□□□□□ -1.79
SCN2BO60939 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.84□□□□□ -1.79
SCN2BO60939 AC023141.6-201ENST00000429418 337 ntBASIC3.84□□□□□ -1.79
SCN2BO60939 COX6B1P7-201ENST00000430845 235 ntBASIC3.84□□□□□ -1.79
SCN2BO60939 AF228730.2-201ENST00000438784 848 ntBASIC3.84□□□□□ -1.79
SCN2BO60939 AL356535.1-201ENST00000440335 398 ntBASIC3.84□□□□□ -1.79
SCN2BO60939 YWHAQP9-201ENST00000445891 512 ntBASIC3.84□□□□□ -1.79
SCN2BO60939 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.84□□□□□ -1.79
SCN2BO60939 AC104629.2-201ENST00000468627 598 ntBASIC3.84□□□□□ -1.79
SCN2BO60939 AC011276.1-201ENST00000469688 323 ntBASIC3.84□□□□□ -1.79
SCN2BO60939 RN7SL271P-201ENST00000487601 295 ntBASIC3.84□□□□□ -1.79
SCN2BO60939 HPRT1P2-201ENST00000505250 544 ntBASIC3.84□□□□□ -1.79
SCN2BO60939 IGLVIV-53-201ENST00000520107 367 ntBASIC3.84□□□□□ -1.79
SCN2BO60939 AC009643.1-201ENST00000532030 391 ntBASIC3.84□□□□□ -1.79
SCN2BO60939 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.84□□□□□ -1.79
SCN2BO60939 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.84□□□□□ -1.79
SCN2BO60939 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.84□□□□□ -1.79
SCN2BO60939 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.84□□□□□ -1.79
SCN2BO60939 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.84□□□□□ -1.79
SCN2BO60939 MIR5684-201ENST00000585074 65 ntBASIC3.84□□□□□ -1.79
SCN2BO60939 FAM60CP-201ENST00000591086 664 ntBASIC3.84□□□□□ -1.79
SCN2BO60939 AC068790.4-201ENST00000602474 263 ntBASIC3.84□□□□□ -1.79
SCN2BO60939 AP003392.5-201ENST00000607857 415 ntBASIC3.84□□□□□ -1.79
SCN2BO60939 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.84□□□□□ -1.79
SCN2BO60939 AC128687.2-201ENST00000609657 566 ntBASIC3.84□□□□□ -1.79
SCN2BO60939 RPL23AP61-201ENST00000623642 466 ntBASIC3.84□□□□□ -1.79
SCN2BO60939 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SCN2BO60939 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SCN2BO60939 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SCN2BO60939 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SCN2BO60939 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.84□□□□□ -1.8
SCN2BO60939 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SCN2BO60939 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SCN2BO60939 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SCN2BO60939 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SCN2BO60939 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SCN2BO60939 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SCN2BO60939 OR4K17-201ENST00000315543 1032 ntBASIC3.83□□□□□ -1.8
SCN2BO60939 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SCN2BO60939 RNA5SP498-201ENST00000411342 120 ntBASIC3.83□□□□□ -1.8
SCN2BO60939 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.83□□□□□ -1.8
SCN2BO60939 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.83□□□□□ -1.8
SCN2BO60939 RPL7P53-201ENST00000421245 739 ntBASIC3.83□□□□□ -1.8
SCN2BO60939 AC092832.1-201ENST00000422934 400 ntBASIC3.83□□□□□ -1.8
SCN2BO60939 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.83□□□□□ -1.8
SCN2BO60939 USP12PY-201ENST00000427677 1064 ntBASIC3.83□□□□□ -1.8
SCN2BO60939 AL392003.1-201ENST00000434394 243 ntBASIC3.83□□□□□ -1.8
SCN2BO60939 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.83□□□□□ -1.8
SCN2BO60939 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.83□□□□□ -1.8
SCN2BO60939 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.83□□□□□ -1.8
SCN2BO60939 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.83□□□□□ -1.8
SCN2BO60939 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.83□□□□□ -1.8
SCN2BO60939 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.83□□□□□ -1.8
SCN2BO60939 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.83□□□□□ -1.8
SCN2BO60939 RPL7P1-201ENST00000468161 747 ntBASIC3.83□□□□□ -1.8
SCN2BO60939 RPL7P9-201ENST00000468715 747 ntBASIC3.83□□□□□ -1.8
SCN2BO60939 RN7SL303P-201ENST00000469773 251 ntBASIC3.83□□□□□ -1.8
SCN2BO60939 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3.83□□□□□ -1.8
SCN2BO60939 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.83□□□□□ -1.8
SCN2BO60939 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
SCN2BO60939 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.83□□□□□ -1.8
SCN2BO60939 AC091167.1-201ENST00000492017 396 ntBASIC3.83□□□□□ -1.8
SCN2BO60939 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.83□□□□□ -1.8
SCN2BO60939 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
SCN2BO60939 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.83□□□□□ -1.8
SCN2BO60939 SS18L2P2-201ENST00000583960 235 ntBASIC3.83□□□□□ -1.8
SCN2BO60939 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.83□□□□□ -1.8
SCN2BO60939 NF1P5-201ENST00000588287 448 ntBASIC3.83□□□□□ -1.8
SCN2BO60939 AC067852.4-201ENST00000590314 478 ntBASIC3.83□□□□□ -1.8
SCN2BO60939 AC006116.5-201ENST00000591936 559 ntBASIC3.83□□□□□ -1.8
SCN2BO60939 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.83□□□□□ -1.8
SCN2BO60939 IPO5P1-202ENST00000600039 287 ntBASIC3.83□□□□□ -1.8
SCN2BO60939 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.83□□□□□ -1.8
SCN2BO60939 AC008745.1-201ENST00000604064 271 ntBASIC3.83□□□□□ -1.8
SCN2BO60939 AC116563.2-201ENST00000624751 535 ntBASIC3.83□□□□□ -1.8
SCN2BO60939 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.83□□□□□ -1.8
SCN2BO60939 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.83□□□□□ -1.8
SCN2BO60939 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SCN2BO60939 BDP1P-201ENST00000582658 1990 ntBASIC3.83□□□□□ -1.8
SCN2BO60939 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SCN2BO60939 AL031985.3-201ENST00000565390 2449 ntBASIC3.83□□□□□ -1.8
SCN2BO60939 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.83□□□□□ -1.8
SCN2BO60939 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SCN2BO60939 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
SCN2BO60939 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.82□□□□□ -1.8
SCN2BO60939 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
SCN2BO60939 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
SCN2BO60939 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.82□□□□□ -1.8
SCN2BO60939 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SCN2BO60939 RNU1-87P-201ENST00000363727 170 ntBASIC3.82□□□□□ -1.8
SCN2BO60939 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
SCN2BO60939 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SCN2BO60939 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SCN2BO60939 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.82□□□□□ -1.8
SCN2BO60939 AL592293.2-201ENST00000422292 996 ntBASIC3.82□□□□□ -1.8
SCN2BO60939 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.82□□□□□ -1.8
SCN2BO60939 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms