Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.05□□□□□ -1.6
PROM1O43490 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PROM1O43490 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.05□□□□□ -1.6
PROM1O43490 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
PROM1O43490 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PROM1O43490 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.05□□□□□ -1.6
PROM1O43490 AC104623.2-202ENST00000623477 4002 ntBASIC5.05□□□□□ -1.6
PROM1O43490 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.05□□□□□ -1.6
PROM1O43490 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PROM1O43490 PABPC1P6-201ENST00000445594 1829 ntBASIC5.04□□□□□ -1.6
PROM1O43490 AC090971.4-201ENST00000560291 1800 ntBASIC5.04□□□□□ -1.6
PROM1O43490 THAP12P5-201ENST00000405864 2275 ntBASIC5.04□□□□□ -1.6
PROM1O43490 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
PROM1O43490 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PROM1O43490 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PROM1O43490 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.04□□□□□ -1.6
PROM1O43490 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PROM1O43490 RNA5SP241-201ENST00000391326 114 ntBASIC5.04□□□□□ -1.6
PROM1O43490 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.04□□□□□ -1.6
PROM1O43490 AC022028.1-201ENST00000412054 408 ntBASIC5.04□□□□□ -1.6
PROM1O43490 PGBD4P8-201ENST00000412993 562 ntBASIC5.04□□□□□ -1.6
PROM1O43490 UBE2V1P10-201ENST00000414685 269 ntBASIC5.04□□□□□ -1.6
PROM1O43490 AL133325.1-201ENST00000421090 382 ntBASIC5.04□□□□□ -1.6
PROM1O43490 AL590609.2-201ENST00000421430 368 ntBASIC5.04□□□□□ -1.6
PROM1O43490 AL049610.1-201ENST00000423374 372 ntBASIC5.04□□□□□ -1.6
PROM1O43490 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.04□□□□□ -1.6
PROM1O43490 AC009263.1-201ENST00000441193 1239 ntBASIC5.04□□□□□ -1.6
PROM1O43490 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.04□□□□□ -1.6
PROM1O43490 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.04□□□□□ -1.6
PROM1O43490 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.04□□□□□ -1.6
PROM1O43490 RNU6-956P-201ENST00000458868 103 ntBASIC5.04□□□□□ -1.6
PROM1O43490 RNU6-1218P-201ENST00000458990 108 ntBASIC5.04□□□□□ -1.6
PROM1O43490 RPL7P48-201ENST00000461513 746 ntBASIC5.04□□□□□ -1.6
PROM1O43490 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.04□□□□□ -1.6
PROM1O43490 AC022133.1-201ENST00000490961 571 ntBASIC5.04□□□□□ -1.6
PROM1O43490 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PROM1O43490 ARL4AP1-201ENST00000503220 705 ntBASIC5.04□□□□□ -1.6
PROM1O43490 DYNLL1P6-201ENST00000503440 264 ntBASIC5.04□□□□□ -1.6
PROM1O43490 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.04□□□□□ -1.6
PROM1O43490 AC147055.4-201ENST00000504399 745 ntBASIC5.04□□□□□ -1.6
PROM1O43490 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.04□□□□□ -1.6
PROM1O43490 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.04□□□□□ -1.6
PROM1O43490 IGJP1-201ENST00000522682 475 ntBASIC5.04□□□□□ -1.6
PROM1O43490 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.04□□□□□ -1.6
PROM1O43490 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.04□□□□□ -1.6
PROM1O43490 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.04□□□□□ -1.6
PROM1O43490 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.04□□□□□ -1.6
PROM1O43490 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.04□□□□□ -1.6
PROM1O43490 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.04□□□□□ -1.6
PROM1O43490 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PROM1O43490 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.04□□□□□ -1.6
PROM1O43490 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.04□□□□□ -1.6
PROM1O43490 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PROM1O43490 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.04□□□□□ -1.6
PROM1O43490 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.04□□□□□ -1.6
PROM1O43490 AL592221.1-201ENST00000605266 382 ntBASIC5.04□□□□□ -1.6
PROM1O43490 AC128687.1-201ENST00000605304 619 ntBASIC5.04□□□□□ -1.6
PROM1O43490 AL359740.1-201ENST00000624340 592 ntBASIC5.04□□□□□ -1.6
PROM1O43490 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.04□□□□□ -1.6
PROM1O43490 AC074101.1-201ENST00000637861 241 ntBASIC5.04□□□□□ -1.6
PROM1O43490 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PROM1O43490 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.04□□□□□ -1.6
PROM1O43490 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.04□□□□□ -1.6
PROM1O43490 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.04□□□□□ -1.6
PROM1O43490 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PROM1O43490 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PROM1O43490 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PROM1O43490 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PROM1O43490 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
PROM1O43490 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PROM1O43490 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PROM1O43490 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PROM1O43490 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PROM1O43490 MTND4P34-201ENST00000572715 1371 ntBASIC5.04□□□□□ -1.6
PROM1O43490 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.03□□□□□ -1.6
PROM1O43490 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
PROM1O43490 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
PROM1O43490 AC011477.1-204ENST00000623416 1325 ntBASIC5.03□□□□□ -1.6
PROM1O43490 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PROM1O43490 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PROM1O43490 AC025574.1-201ENST00000554784 1653 ntBASIC5.03□□□□□ -1.6
PROM1O43490 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PROM1O43490 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PROM1O43490 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.03□□□□□ -1.6
PROM1O43490 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
PROM1O43490 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PROM1O43490 RNU6-98P-201ENST00000384173 107 ntBASIC5.03□□□□□ -1.6
PROM1O43490 RNU6-1215P-201ENST00000384441 102 ntBASIC5.03□□□□□ -1.6
PROM1O43490 Y_RNA.517-201ENST00000384551 106 ntBASIC5.03□□□□□ -1.6
PROM1O43490 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PROM1O43490 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PROM1O43490 RNA5SP339-201ENST00000390987 122 ntBASIC5.03□□□□□ -1.6
PROM1O43490 AL645927.1-201ENST00000396783 406 ntBASIC5.03□□□□□ -1.6
PROM1O43490 RN7SKP142-201ENST00000411236 328 ntBASIC5.03□□□□□ -1.6
PROM1O43490 AL663109.1-201ENST00000411498 844 ntBASIC5.03□□□□□ -1.6
PROM1O43490 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.03□□□□□ -1.6
PROM1O43490 MED14P1-201ENST00000430517 648 ntBASIC5.03□□□□□ -1.6
PROM1O43490 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.03□□□□□ -1.6
PROM1O43490 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC5.03□□□□□ -1.6
PROM1O43490 RPL19P16-201ENST00000433839 588 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms