Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PRPF3O43395 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
PRPF3O43395 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.58□□□□□ -1.52
PRPF3O43395 AC012414.7-202ENST00000622705 1090 ntBASIC5.58□□□□□ -1.52
PRPF3O43395 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.58□□□□□ -1.52
PRPF3O43395 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.58□□□□□ -1.52
PRPF3O43395 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PRPF3O43395 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
PRPF3O43395 DHX9P1-201ENST00000436565 3076 ntBASIC5.58□□□□□ -1.52
PRPF3O43395 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PRPF3O43395 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PRPF3O43395 NCLP2-201ENST00000416078 1462 ntBASIC5.58□□□□□ -1.52
PRPF3O43395 PCAT14-202ENST00000627127 3935 ntBASIC5.57□□□□□ -1.52
PRPF3O43395 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF3O43395 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.57□□□□□ -1.52
PRPF3O43395 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PRPF3O43395 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF3O43395 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF3O43395 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF3O43395 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF3O43395 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PRPF3O43395 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.57□□□□□ -1.52
PRPF3O43395 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF3O43395 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
PRPF3O43395 SNORA74A-201ENST00000364089 198 ntBASIC5.57□□□□□ -1.52
PRPF3O43395 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.57□□□□□ -1.52
PRPF3O43395 RNU6-1300P-201ENST00000391046 108 ntBASIC5.57□□□□□ -1.52
PRPF3O43395 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF3O43395 MIR937-201ENST00000401271 86 ntBASIC5.57□□□□□ -1.52
PRPF3O43395 AL139098.1-201ENST00000407291 389 ntBASIC5.57□□□□□ -1.52
PRPF3O43395 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.57□□□□□ -1.52
PRPF3O43395 VPS26BP1-201ENST00000417155 755 ntBASIC5.57□□□□□ -1.52
PRPF3O43395 AL358176.3-201ENST00000420757 454 ntBASIC5.57□□□□□ -1.52
PRPF3O43395 CKS1BP6-201ENST00000424932 240 ntBASIC5.57□□□□□ -1.52
PRPF3O43395 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.57□□□□□ -1.52
PRPF3O43395 RPS6P15-201ENST00000431996 751 ntBASIC5.57□□□□□ -1.52
PRPF3O43395 SEPT7P5-201ENST00000434048 306 ntBASIC5.57□□□□□ -1.52
PRPF3O43395 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.57□□□□□ -1.52
PRPF3O43395 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.57□□□□□ -1.52
PRPF3O43395 EXTL2P1-201ENST00000446218 416 ntBASIC5.57□□□□□ -1.52
PRPF3O43395 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.57□□□□□ -1.52
PRPF3O43395 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.57□□□□□ -1.52
PRPF3O43395 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.57□□□□□ -1.52
PRPF3O43395 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.57□□□□□ -1.52
PRPF3O43395 AC104971.1-201ENST00000495117 578 ntBASIC5.57□□□□□ -1.52
PRPF3O43395 RN7SL591P-201ENST00000496150 292 ntBASIC5.57□□□□□ -1.52
PRPF3O43395 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF3O43395 MTCYBP35-201ENST00000503630 1137 ntBASIC5.57□□□□□ -1.52
PRPF3O43395 HMGB3P16-201ENST00000508037 287 ntBASIC5.57□□□□□ -1.52
PRPF3O43395 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.57□□□□□ -1.52
PRPF3O43395 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.57□□□□□ -1.52
PRPF3O43395 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.57□□□□□ -1.52
PRPF3O43395 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.57□□□□□ -1.52
PRPF3O43395 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.57□□□□□ -1.52
PRPF3O43395 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.57□□□□□ -1.52
PRPF3O43395 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.57□□□□□ -1.52
PRPF3O43395 AC090888.2-201ENST00000559765 1144 ntBASIC5.57□□□□□ -1.52
PRPF3O43395 AC090515.3-201ENST00000560431 315 ntBASIC5.57□□□□□ -1.52
PRPF3O43395 AL390726.5-202ENST00000564800 256 ntBASIC5.57□□□□□ -1.52
PRPF3O43395 AC093519.1-201ENST00000566109 298 ntBASIC5.57□□□□□ -1.52
PRPF3O43395 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.57□□□□□ -1.52
PRPF3O43395 MTND3P19-201ENST00000603825 345 ntBASIC5.57□□□□□ -1.52
PRPF3O43395 AL158163.2-201ENST00000619110 700 ntBASIC5.57□□□□□ -1.52
PRPF3O43395 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.57□□□□□ -1.52
PRPF3O43395 AC068620.4-201ENST00000636730 1182 ntBASIC5.57□□□□□ -1.52
PRPF3O43395 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PRPF3O43395 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.57□□□□□ -1.52
PRPF3O43395 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF3O43395 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF3O43395 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF3O43395 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF3O43395 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.57□□□□□ -1.52
PRPF3O43395 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.57□□□□□ -1.52
PRPF3O43395 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRPF3O43395 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PRPF3O43395 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PRPF3O43395 AL022393.1-201ENST00000625142 1677 ntBASIC5.56□□□□□ -1.52
PRPF3O43395 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.56□□□□□ -1.52
PRPF3O43395 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PRPF3O43395 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PRPF3O43395 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.56□□□□□ -1.52
PRPF3O43395 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PRPF3O43395 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
PRPF3O43395 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PRPF3O43395 RNU6-115P-201ENST00000364310 107 ntBASIC5.56□□□□□ -1.52
PRPF3O43395 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.56□□□□□ -1.52
PRPF3O43395 RNU6-1242P-201ENST00000391052 103 ntBASIC5.56□□□□□ -1.52
PRPF3O43395 FABP12P1-201ENST00000401911 322 ntBASIC5.56□□□□□ -1.52
PRPF3O43395 U3.35-201ENST00000408405 208 ntBASIC5.56□□□□□ -1.52
PRPF3O43395 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.56□□□□□ -1.52
PRPF3O43395 AL590762.4-201ENST00000425885 253 ntBASIC5.56□□□□□ -1.52
PRPF3O43395 MOB1AP1-201ENST00000430903 535 ntBASIC5.56□□□□□ -1.52
PRPF3O43395 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.56□□□□□ -1.52
PRPF3O43395 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.56□□□□□ -1.52
PRPF3O43395 AC241584.1-201ENST00000438469 1241 ntBASIC5.56□□□□□ -1.52
PRPF3O43395 RPL12P3-201ENST00000440080 396 ntBASIC5.56□□□□□ -1.52
PRPF3O43395 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PRPF3O43395 RPS26P56-201ENST00000444468 240 ntBASIC5.56□□□□□ -1.52
PRPF3O43395 Z77249.1-201ENST00000444622 1175 ntBASIC5.56□□□□□ -1.52
PRPF3O43395 RPL7P59-201ENST00000447700 943 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms