Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC28A1O00337 AC017037.1-201ENST00000508460 471 ntBASIC4.17□□□□□ -1.74
SLC28A1O00337 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC28A1O00337 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.17□□□□□ -1.74
SLC28A1O00337 OR5AN2P-201ENST00000534535 896 ntBASIC4.17□□□□□ -1.74
SLC28A1O00337 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC28A1O00337 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC28A1O00337 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC28A1O00337 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SLC28A1O00337 AC098483.2-201ENST00000603158 454 ntBASIC4.17□□□□□ -1.74
SLC28A1O00337 ABI1P1-201ENST00000603375 1120 ntBASIC4.17□□□□□ -1.74
SLC28A1O00337 AC005972.3-201ENST00000606304 481 ntBASIC4.17□□□□□ -1.74
SLC28A1O00337 AC084824.5-201ENST00000612009 413 ntBASIC4.17□□□□□ -1.74
SLC28A1O00337 AC243756.2-201ENST00000618406 463 ntBASIC4.17□□□□□ -1.74
SLC28A1O00337 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SLC28A1O00337 AC000123.2-201ENST00000623124 461 ntBASIC4.17□□□□□ -1.74
SLC28A1O00337 AP006248.2-201ENST00000623309 592 ntBASIC4.17□□□□□ -1.74
SLC28A1O00337 AL590396.2-201ENST00000636511 1041 ntBASIC4.17□□□□□ -1.74
SLC28A1O00337 AC097504.1-201ENST00000515103 2415 ntBASIC4.17□□□□□ -1.74
SLC28A1O00337 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SLC28A1O00337 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.17□□□□□ -1.74
SLC28A1O00337 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SLC28A1O00337 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.17□□□□□ -1.74
SLC28A1O00337 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SLC28A1O00337 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SLC28A1O00337 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC28A1O00337 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC28A1O00337 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC28A1O00337 AC119744.1-201ENST00000454746 1715 ntBASIC4.16□□□□□ -1.74
SLC28A1O00337 AC012020.1-201ENST00000624541 1728 ntBASIC4.16□□□□□ -1.74
SLC28A1O00337 OR4K15-201ENST00000305051 1216 ntBASIC4.16□□□□□ -1.74
SLC28A1O00337 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC28A1O00337 AC097374.1-203ENST00000400783 485 ntBASIC4.16□□□□□ -1.74
SLC28A1O00337 RN7SKP278-201ENST00000410504 342 ntBASIC4.16□□□□□ -1.74
SLC28A1O00337 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SLC28A1O00337 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC28A1O00337 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SLC28A1O00337 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.16□□□□□ -1.74
SLC28A1O00337 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.16□□□□□ -1.74
SLC28A1O00337 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC28A1O00337 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SLC28A1O00337 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC28A1O00337 AC133473.1-201ENST00000455173 299 ntBASIC4.16□□□□□ -1.74
SLC28A1O00337 DHFRP3-201ENST00000455595 559 ntBASIC4.16□□□□□ -1.74
SLC28A1O00337 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.16□□□□□ -1.74
SLC28A1O00337 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC28A1O00337 RPL32P14-201ENST00000463196 378 ntBASIC4.16□□□□□ -1.74
SLC28A1O00337 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.16□□□□□ -1.74
SLC28A1O00337 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.16□□□□□ -1.74
SLC28A1O00337 AC093270.2-201ENST00000486157 792 ntBASIC4.16□□□□□ -1.74
SLC28A1O00337 AC025445.1-201ENST00000502728 300 ntBASIC4.16□□□□□ -1.74
SLC28A1O00337 AC108145.1-201ENST00000503770 153 ntBASIC4.16□□□□□ -1.74
SLC28A1O00337 AC104108.1-201ENST00000509930 412 ntBASIC4.16□□□□□ -1.74
SLC28A1O00337 AC121161.1-201ENST00000510606 652 ntBASIC4.16□□□□□ -1.74
SLC28A1O00337 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC28A1O00337 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.16□□□□□ -1.74
SLC28A1O00337 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC28A1O00337 AC090819.1-201ENST00000523800 1111 ntBASIC4.16□□□□□ -1.74
SLC28A1O00337 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC28A1O00337 AP003717.3-201ENST00000544832 1180 ntBASIC4.16□□□□□ -1.74
SLC28A1O00337 AC084783.1-201ENST00000565846 910 ntBASIC4.16□□□□□ -1.74
SLC28A1O00337 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC28A1O00337 AC015911.5-201ENST00000587076 451 ntBASIC4.16□□□□□ -1.74
SLC28A1O00337 AC008782.1-201ENST00000603386 430 ntBASIC4.16□□□□□ -1.74
SLC28A1O00337 AC026741.1-201ENST00000605892 482 ntBASIC4.16□□□□□ -1.74
SLC28A1O00337 FAM25E-202ENST00000608562 189 ntBASIC4.16□□□□□ -1.74
SLC28A1O00337 AC096586.1-201ENST00000610267 561 ntBASIC4.16□□□□□ -1.74
SLC28A1O00337 VN1R9P-201ENST00000614184 867 ntBASIC4.16□□□□□ -1.74
SLC28A1O00337 MIR6719-201ENST00000622428 87 ntBASIC4.16□□□□□ -1.74
SLC28A1O00337 AL356121.2-201ENST00000624715 780 ntBASIC4.16□□□□□ -1.74
SLC28A1O00337 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SLC28A1O00337 AL592148.3-201ENST00000608771 2646 ntBASIC4.16□□□□□ -1.74
SLC28A1O00337 OR56B2P-202ENST00000641377 2453 ntBASIC4.16□□□□□ -1.74
SLC28A1O00337 AC104446.1-201ENST00000613728 1321 ntBASIC4.16□□□□□ -1.74
SLC28A1O00337 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC28A1O00337 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.16□□□□□ -1.74
SLC28A1O00337 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SLC28A1O00337 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SLC28A1O00337 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SLC28A1O00337 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.15□□□□□ -1.75
SLC28A1O00337 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SLC28A1O00337 RNA5SP388-201ENST00000362584 119 ntBASIC4.15□□□□□ -1.75
SLC28A1O00337 RNU6-1339P-201ENST00000363574 91 ntBASIC4.15□□□□□ -1.75
SLC28A1O00337 RNU1-130P-201ENST00000363930 160 ntBASIC4.15□□□□□ -1.75
SLC28A1O00337 RHOT1P2-201ENST00000366423 333 ntBASIC4.15□□□□□ -1.75
SLC28A1O00337 MIR550A3-201ENST00000390735 95 ntBASIC4.15□□□□□ -1.75
SLC28A1O00337 SNORA40.4-201ENST00000390971 128 ntBASIC4.15□□□□□ -1.75
SLC28A1O00337 HNRNPDP2-201ENST00000406475 478 ntBASIC4.15□□□□□ -1.75
SLC28A1O00337 AC004022.2-201ENST00000413824 193 ntBASIC4.15□□□□□ -1.75
SLC28A1O00337 BX664727.1-201ENST00000416024 466 ntBASIC4.15□□□□□ -1.75
SLC28A1O00337 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.15□□□□□ -1.75
SLC28A1O00337 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.15□□□□□ -1.75
SLC28A1O00337 AL360081.1-201ENST00000428299 555 ntBASIC4.15□□□□□ -1.75
SLC28A1O00337 USP9YP9-201ENST00000429406 715 ntBASIC4.15□□□□□ -1.75
SLC28A1O00337 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.15□□□□□ -1.75
SLC28A1O00337 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.15□□□□□ -1.75
SLC28A1O00337 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.15□□□□□ -1.75
SLC28A1O00337 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.15□□□□□ -1.75
SLC28A1O00337 RN7SL585P-201ENST00000470538 280 ntBASIC4.15□□□□□ -1.75
SLC28A1O00337 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms