Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 RN7SKP156-201ENST00000410308 342 ntBASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 AL445528.1-201ENST00000426330 420 ntBASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 RANP8-201ENST00000444720 713 ntBASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 AC044797.1-201ENST00000445744 679 ntBASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 CYCSP53-201ENST00000455540 265 ntBASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 RPS20P21-201ENST00000466859 343 ntBASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 AC007537.2-201ENST00000472093 511 ntBASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 SNORA67.7-201ENST00000516664 135 ntBASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 SCARNA14-201ENST00000516903 136 ntBASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 MIR3158-1-201ENST00000583596 81 ntBASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 AC245389.1-201ENST00000605141 529 ntBASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.21□□□□□ -1.74
SMIM28A0A1B0GU29 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 AC107027.3-201ENST00000565095 3473 ntBASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 AL590704.1-201ENST00000402856 794 ntBASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 AC007563.3-201ENST00000433233 371 ntBASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 AC069285.2-201ENST00000440210 275 ntBASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 VN1R25P-201ENST00000443385 738 ntBASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 AL500522.2-201ENST00000448562 343 ntBASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 VN1R40P-201ENST00000455196 941 ntBASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 OR52A4P-202ENST00000481634 799 ntBASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 RPL21P129-201ENST00000491732 478 ntBASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 FABP5P6-201ENST00000510588 409 ntBASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 NPM1P47-201ENST00000560843 856 ntBASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 AC233702.9-201ENST00000581528 203 ntBASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 AC003001.2-201ENST00000616294 831 ntBASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 AC039056.2-201ENST00000622261 511 ntBASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 AC019080.5-201ENST00000624891 757 ntBASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 AF001550.2-201ENST00000636643 217 ntBASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SMIM28A0A1B0GU29 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.19□□□□□ -1.74
SMIM28A0A1B0GU29 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SMIM28A0A1B0GU29 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
SMIM28A0A1B0GU29 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SMIM28A0A1B0GU29 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SMIM28A0A1B0GU29 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SMIM28A0A1B0GU29 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SMIM28A0A1B0GU29 MAPK10-349ENST00000641767 3661 ntBASIC4.19□□□□□ -1.74
SMIM28A0A1B0GU29 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SMIM28A0A1B0GU29 OR4A15-201ENST00000314706 1035 ntBASIC4.19□□□□□ -1.74
SMIM28A0A1B0GU29 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SMIM28A0A1B0GU29 MT-TP-201ENST00000387461 68 ntBASIC4.19□□□□□ -1.74
SMIM28A0A1B0GU29 SNORA68.2-201ENST00000391263 128 ntBASIC4.19□□□□□ -1.74
SMIM28A0A1B0GU29 ATP5F1P3-201ENST00000397213 657 ntBASIC4.19□□□□□ -1.74
SMIM28A0A1B0GU29 AL034403.1-201ENST00000399414 885 ntBASIC4.19□□□□□ -1.74
SMIM28A0A1B0GU29 ZNF602P-201ENST00000405929 924 ntBASIC4.19□□□□□ -1.74
SMIM28A0A1B0GU29 RNU6ATAC-201ENST00000408749 126 ntBASIC4.19□□□□□ -1.74
SMIM28A0A1B0GU29 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.19□□□□□ -1.74
SMIM28A0A1B0GU29 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SMIM28A0A1B0GU29 AC093084.1-201ENST00000424233 687 ntBASIC4.19□□□□□ -1.74
SMIM28A0A1B0GU29 MTND4LP13-201ENST00000425022 298 ntBASIC4.19□□□□□ -1.74
SMIM28A0A1B0GU29 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.19□□□□□ -1.74
SMIM28A0A1B0GU29 HSPE1P16-201ENST00000426640 348 ntBASIC4.19□□□□□ -1.74
SMIM28A0A1B0GU29 AL590623.1-201ENST00000427864 105 ntBASIC4.19□□□□□ -1.74
SMIM28A0A1B0GU29 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SMIM28A0A1B0GU29 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.19□□□□□ -1.74
SMIM28A0A1B0GU29 AC093716.1-201ENST00000435923 377 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms