Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDHGA11Q9Y5H2 MTCO1P12-201ENST00000414273 1543 ntBASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 RNU1-55P-201ENST00000365510 158 ntBASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 MIR514A2-201ENST00000385131 88 ntBASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 MIR514A3-201ENST00000385132 88 ntBASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 RNA5SP474-201ENST00000391234 90 ntBASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 AL583835.1-201ENST00000399570 407 ntBASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 MICG-208ENST00000416822 132 ntBASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 AC108734.1-201ENST00000439549 399 ntBASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 RPS7P4-201ENST00000444127 582 ntBASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 snoU13.8-201ENST00000458890 104 ntBASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 RPL21P99-201ENST00000480369 423 ntBASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 TAF8-207ENST00000482432 556 ntTSL 2 BASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 RN7SL868P-201ENST00000485915 303 ntBASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 AC055855.1-201ENST00000489563 579 ntBASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 SNORD27.1-201ENST00000516319 72 ntBASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 CARSP2-201ENST00000520688 277 ntBASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 MRPS16P1-201ENST00000523462 412 ntBASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 AP001029.3-201ENST00000588063 596 ntBASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 AC006006.1-201ENST00000603082 144 ntBASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 AL590032.1-201ENST00000604920 252 ntBASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 HSPA8P14-201ENST00000552265 1805 ntBASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 AC011504.1-201ENST00000623331 4103 ntBASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 RBPJP2-201ENST00000618187 1444 ntBASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHGA11Q9Y5H2 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 RACGAP1P-201ENST00000550663 1879 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 ZNF806-201ENST00000438300 1774 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 AC007012.2-201ENST00000623206 1676 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 TNPO1P2-201ENST00000426249 2665 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 AC025809.2-201ENST00000625085 1802 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 AC067945.1-201ENST00000342609 618 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 Y_RNA.146-201ENST00000363549 102 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 Y_RNA.373-201ENST00000365600 103 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 RNU6-1207P-201ENST00000384343 107 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 RPL31P45-201ENST00000419532 356 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 AC012065.2-201ENST00000421295 375 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 AL138479.1-201ENST00000426913 484 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 OR4K11P-201ENST00000431829 904 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 USP24P1-201ENST00000433802 779 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 UBE2V1P13-201ENST00000436983 439 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 AL845321.1-201ENST00000444603 348 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 RPL23AP28-201ENST00000448062 470 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 RPL7AP71-201ENST00000451120 739 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 RPS10P28-201ENST00000480396 498 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 CDV3-208ENST00000511392 554 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 AC011979.2-201ENST00000527568 352 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 AC089984.3-201ENST00000552838 363 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 AC019322.1-201ENST00000571869 389 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 AC090615.1-201ENST00000577519 154 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 OR4K8P-201ENST00000578842 1048 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 POLR3GP2-201ENST00000588366 668 ntBASIC6.49□□□□□ -1.37
PCDHGA11Q9Y5H2 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms