Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 MIR3074-201ENST00000384885 81 ntBASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 SNORD66.1-201ENST00000391230 76 ntBASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 MIR1179-201ENST00000408703 91 ntBASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 RPL7P2-201ENST00000427639 268 ntBASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 AL157884.3-201ENST00000448273 1184 ntBASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 AC005008.1-201ENST00000456151 612 ntBASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 RNA5SP246-201ENST00000458909 119 ntBASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 EIF2S2P4-201ENST00000461070 984 ntBASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 AC104629.2-201ENST00000468627 598 ntBASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 AC090543.1-201ENST00000492168 485 ntBASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 AC108064.1-201ENST00000513791 460 ntBASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 SMARCE1P4-201ENST00000523647 241 ntBASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 OR8X1P-201ENST00000534542 869 ntBASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 AC074050.1-201ENST00000563247 211 ntBASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 AC022655.2-201ENST00000577280 318 ntBASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.12□□□□□ -1.75
APOBEC3BQ9UH17 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 OR11H4-201ENST00000315409 1082 ntBASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 RN7SKP44-201ENST00000363602 316 ntBASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 GCNT6-201ENST00000379591 934 ntBASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 CCNB2P1-201ENST00000399411 1150 ntBASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 RNA5SP239-201ENST00000410218 129 ntBASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 UBTFL3-201ENST00000418934 1024 ntBASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 FAR1P1-201ENST00000427163 934 ntBASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 AL645939.1-201ENST00000453429 797 ntBASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 UBTFL6-201ENST00000477929 1024 ntBASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 AC104164.2-201ENST00000496953 495 ntBASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 HAUS1P1-201ENST00000505275 832 ntBASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 AC021146.3-201ENST00000511911 260 ntBASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 MTND4LP31-201ENST00000514859 294 ntBASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 MED28P5-201ENST00000528254 438 ntBASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 AC100770.1-201ENST00000532310 322 ntBASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 AC084757.1-201ENST00000559987 490 ntBASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 AC092474.3-201ENST00000603022 568 ntBASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 AC010680.3-201ENST00000604215 520 ntBASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 MIR6875-201ENST00000617506 72 ntBASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 AL133370.2-201ENST00000619934 439 ntBASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.11□□□□□ -1.75
APOBEC3BQ9UH17 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms