Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 AC093765.1-201ENST00000603758 881 ntBASIC5.35□□□□□ -1.55
COL20A1Q9P218 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 DPRXP5-201ENST00000604662 539 ntBASIC5.35□□□□□ -1.55
COL20A1Q9P218 AP005137.2-201ENST00000609238 400 ntBASIC5.35□□□□□ -1.55
COL20A1Q9P218 AC019193.2-201ENST00000610012 634 ntBASIC5.35□□□□□ -1.55
COL20A1Q9P218 AC083809.1-201ENST00000615051 472 ntBASIC5.35□□□□□ -1.55
COL20A1Q9P218 AL158163.2-201ENST00000619110 700 ntBASIC5.35□□□□□ -1.55
COL20A1Q9P218 AL157770.1-201ENST00000623049 439 ntBASIC5.35□□□□□ -1.55
COL20A1Q9P218 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL20A1Q9P218 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL20A1Q9P218 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL20A1Q9P218 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
COL20A1Q9P218 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL20A1Q9P218 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
COL20A1Q9P218 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL20A1Q9P218 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.34□□□□□ -1.55
COL20A1Q9P218 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.34□□□□□ -1.55
COL20A1Q9P218 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL20A1Q9P218 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL20A1Q9P218 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.34□□□□□ -1.55
COL20A1Q9P218 RNU6-1214P-201ENST00000363650 109 ntBASIC5.34□□□□□ -1.55
COL20A1Q9P218 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.34□□□□□ -1.55
COL20A1Q9P218 GSTM3P2-201ENST00000412746 530 ntBASIC5.34□□□□□ -1.55
COL20A1Q9P218 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.34□□□□□ -1.55
COL20A1Q9P218 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.34□□□□□ -1.55
COL20A1Q9P218 HMGN2P27-201ENST00000427352 270 ntBASIC5.34□□□□□ -1.55
COL20A1Q9P218 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.34□□□□□ -1.55
COL20A1Q9P218 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.34□□□□□ -1.55
COL20A1Q9P218 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.34□□□□□ -1.55
COL20A1Q9P218 EXTL2P1-201ENST00000446218 416 ntBASIC5.34□□□□□ -1.55
COL20A1Q9P218 OR6K5P-201ENST00000447050 945 ntBASIC5.34□□□□□ -1.55
COL20A1Q9P218 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.34□□□□□ -1.55
COL20A1Q9P218 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.34□□□□□ -1.55
COL20A1Q9P218 AC005229.2-201ENST00000456995 399 ntBASIC5.34□□□□□ -1.55
COL20A1Q9P218 AC084024.2-201ENST00000503480 791 ntBASIC5.34□□□□□ -1.55
COL20A1Q9P218 AC091951.3-201ENST00000504093 246 ntBASIC5.34□□□□□ -1.55
COL20A1Q9P218 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.34□□□□□ -1.55
COL20A1Q9P218 AC025674.1-201ENST00000507074 324 ntBASIC5.34□□□□□ -1.55
COL20A1Q9P218 AC007016.1-201ENST00000512110 244 ntBASIC5.34□□□□□ -1.55
COL20A1Q9P218 AC118465.1-201ENST00000513820 1271 ntBASIC5.34□□□□□ -1.55
COL20A1Q9P218 AC138938.1-201ENST00000515431 782 ntBASIC5.34□□□□□ -1.55
COL20A1Q9P218 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.34□□□□□ -1.55
COL20A1Q9P218 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.34□□□□□ -1.55
COL20A1Q9P218 AADACP1-206ENST00000561502 1193 ntBASIC5.34□□□□□ -1.55
COL20A1Q9P218 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.34□□□□□ -1.55
COL20A1Q9P218 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.34□□□□□ -1.55
COL20A1Q9P218 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.34□□□□□ -1.55
COL20A1Q9P218 AC097478.2-201ENST00000610572 514 ntBASIC5.34□□□□□ -1.55
COL20A1Q9P218 AC100847.1-201ENST00000611316 481 ntBASIC5.34□□□□□ -1.55
COL20A1Q9P218 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.34□□□□□ -1.55
COL20A1Q9P218 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.34□□□□□ -1.55
COL20A1Q9P218 CU459211.1-201ENST00000635667 749 ntBASIC5.34□□□□□ -1.55
COL20A1Q9P218 MIR1322-201ENST00000638013 71 ntBASIC5.34□□□□□ -1.55
COL20A1Q9P218 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL20A1Q9P218 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL20A1Q9P218 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL20A1Q9P218 AC006484.1-201ENST00000435086 1884 ntBASIC5.34□□□□□ -1.55
COL20A1Q9P218 AL592148.3-201ENST00000608771 2646 ntBASIC5.34□□□□□ -1.55
COL20A1Q9P218 AC022031.1-201ENST00000585985 2593 ntBASIC5.34□□□□□ -1.55
COL20A1Q9P218 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
COL20A1Q9P218 AC100778.3-201ENST00000580060 1750 ntBASIC5.34□□□□□ -1.56
COL20A1Q9P218 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.34□□□□□ -1.56
COL20A1Q9P218 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.56
COL20A1Q9P218 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
COL20A1Q9P218 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.34□□□□□ -1.56
COL20A1Q9P218 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL20A1Q9P218 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.33□□□□□ -1.56
COL20A1Q9P218 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL20A1Q9P218 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL20A1Q9P218 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL20A1Q9P218 HMGB1P5-201ENST00000255320 642 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
COL20A1Q9P218 AC021146.4-201ENST00000309229 279 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL20A1Q9P218 FAM133CP-201ENST00000332869 704 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 AC008549.2-201ENST00000333482 706 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 SNORD116.1-201ENST00000365628 92 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 Y_RNA.465-201ENST00000384293 102 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 U3.35-201ENST00000408405 208 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 RN7SKP267-201ENST00000410381 285 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 RNU6-575P-201ENST00000411326 105 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 ELOCP19-201ENST00000411919 318 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.33□□□□□ -1.56
COL20A1Q9P218 P2RY10P2-201ENST00000416730 913 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.33□□□□□ -1.56
COL20A1Q9P218 E2F6P2-201ENST00000420708 748 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 AC104333.2-201ENST00000422630 192 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 AC009480.2-201ENST00000422916 432 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.33□□□□□ -1.56
COL20A1Q9P218 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.33□□□□□ -1.56
COL20A1Q9P218 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.33□□□□□ -1.56
COL20A1Q9P218 GTF2IP7-202ENST00000436677 309 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 H2AFZP5-201ENST00000446960 382 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.33□□□□□ -1.56
COL20A1Q9P218 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.33□□□□□ -1.56
COL20A1Q9P218 RPL37P3-201ENST00000456825 293 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms