Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 GTF2IP22-201ENST00000554443 182 ntBASIC5.35□□□□□ -1.55
USP47Q96K76 AC019176.2-201ENST00000611579 315 ntBASIC5.35□□□□□ -1.55
USP47Q96K76 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.35□□□□□ -1.55
USP47Q96K76 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
USP47Q96K76 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.35□□□□□ -1.55
USP47Q96K76 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
USP47Q96K76 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
USP47Q96K76 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
USP47Q96K76 ZNF602P-201ENST00000405929 924 ntBASIC5.34□□□□□ -1.55
USP47Q96K76 SNORA57.3-201ENST00000411095 141 ntBASIC5.34□□□□□ -1.55
USP47Q96K76 TCEA1P2-201ENST00000420496 906 ntBASIC5.34□□□□□ -1.55
USP47Q96K76 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.34□□□□□ -1.55
USP47Q96K76 snoU13.24-201ENST00000458998 104 ntBASIC5.34□□□□□ -1.55
USP47Q96K76 AL133162.1-201ENST00000463228 453 ntBASIC5.34□□□□□ -1.55
USP47Q96K76 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.34□□□□□ -1.55
USP47Q96K76 ASNSP4-201ENST00000511103 447 ntBASIC5.34□□□□□ -1.55
USP47Q96K76 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.34□□□□□ -1.55
USP47Q96K76 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.34□□□□□ -1.55
USP47Q96K76 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.34□□□□□ -1.55
USP47Q96K76 SRGNP1-201ENST00000603392 451 ntBASIC5.34□□□□□ -1.55
USP47Q96K76 AC026368.1-201ENST00000614934 690 ntBASIC5.34□□□□□ -1.55
USP47Q96K76 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.34□□□□□ -1.55
USP47Q96K76 AC009093.8-201ENST00000641769 292 ntBASIC5.34□□□□□ -1.55
USP47Q96K76 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
USP47Q96K76 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.34□□□□□ -1.56
USP47Q96K76 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.34□□□□□ -1.56
USP47Q96K76 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.34□□□□□ -1.56
USP47Q96K76 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
USP47Q96K76 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
USP47Q96K76 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC5.33□□□□□ -1.56
USP47Q96K76 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
USP47Q96K76 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
USP47Q96K76 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
USP47Q96K76 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.33□□□□□ -1.56
USP47Q96K76 AC092647.1-201ENST00000420654 287 ntBASIC5.33□□□□□ -1.56
USP47Q96K76 AC091286.1-201ENST00000431233 461 ntBASIC5.33□□□□□ -1.56
USP47Q96K76 BX119904.1-201ENST00000432026 348 ntBASIC5.33□□□□□ -1.56
USP47Q96K76 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
USP47Q96K76 AC022336.1-201ENST00000475510 337 ntBASIC5.33□□□□□ -1.56
USP47Q96K76 AC112184.1-201ENST00000505179 312 ntBASIC5.33□□□□□ -1.56
USP47Q96K76 AL133247.2-201ENST00000603236 482 ntBASIC5.33□□□□□ -1.56
USP47Q96K76 RNU1-30P-201ENST00000606575 163 ntBASIC5.33□□□□□ -1.56
USP47Q96K76 AL391261.4-201ENST00000616012 481 ntBASIC5.33□□□□□ -1.56
USP47Q96K76 AC009237.17-201ENST00000618111 748 ntBASIC5.33□□□□□ -1.56
USP47Q96K76 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.33□□□□□ -1.56
USP47Q96K76 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
USP47Q96K76 AP004289.2-201ENST00000444413 1457 ntBASIC5.33□□□□□ -1.56
USP47Q96K76 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.33□□□□□ -1.56
USP47Q96K76 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
USP47Q96K76 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
USP47Q96K76 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
USP47Q96K76 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.33□□□□□ -1.56
USP47Q96K76 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
USP47Q96K76 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
USP47Q96K76 AL391219.1-201ENST00000422570 483 ntBASIC5.32□□□□□ -1.56
USP47Q96K76 AL390879.2-203ENST00000426943 1121 ntBASIC5.32□□□□□ -1.56
USP47Q96K76 RPS3AP12-201ENST00000443616 753 ntBASIC5.32□□□□□ -1.56
USP47Q96K76 YWHAQP9-201ENST00000445891 512 ntBASIC5.32□□□□□ -1.56
USP47Q96K76 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.32□□□□□ -1.56
USP47Q96K76 AC111000.5-201ENST00000506559 1178 ntBASIC5.32□□□□□ -1.56
USP47Q96K76 AC110768.1-201ENST00000509222 400 ntBASIC5.32□□□□□ -1.56
USP47Q96K76 DUXAP2-201ENST00000519198 589 ntBASIC5.32□□□□□ -1.56
USP47Q96K76 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
USP47Q96K76 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.32□□□□□ -1.56
USP47Q96K76 AP003392.5-201ENST00000607857 415 ntBASIC5.32□□□□□ -1.56
USP47Q96K76 AC016252.1-201ENST00000609721 474 ntBASIC5.32□□□□□ -1.56
USP47Q96K76 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
USP47Q96K76 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.32□□□□□ -1.56
USP47Q96K76 AC233968.1-201ENST00000611212 1300 ntBASIC5.32□□□□□ -1.56
USP47Q96K76 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.32□□□□□ -1.56
USP47Q96K76 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
USP47Q96K76 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.32□□□□□ -1.56
USP47Q96K76 ZNF285B-201ENST00000561698 1767 ntBASIC5.32□□□□□ -1.56
USP47Q96K76 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP47Q96K76 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.31□□□□□ -1.56
USP47Q96K76 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.31□□□□□ -1.56
USP47Q96K76 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.31□□□□□ -1.56
USP47Q96K76 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.31□□□□□ -1.56
USP47Q96K76 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USP47Q96K76 AC104306.1-201ENST00000449702 371 ntBASIC5.31□□□□□ -1.56
USP47Q96K76 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.31□□□□□ -1.56
USP47Q96K76 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.31□□□□□ -1.56
USP47Q96K76 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.31□□□□□ -1.56
USP47Q96K76 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.31□□□□□ -1.56
USP47Q96K76 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.31□□□□□ -1.56
USP47Q96K76 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.31□□□□□ -1.56
USP47Q96K76 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP47Q96K76 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP47Q96K76 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USP47Q96K76 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP47Q96K76 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.31□□□□□ -1.56
USP47Q96K76 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP47Q96K76 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC5.31□□□□□ -1.56
USP47Q96K76 AC024560.2-201ENST00000507981 1497 ntBASIC5.31□□□□□ -1.56
USP47Q96K76 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
USP47Q96K76 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.3□□□□□ -1.56
USP47Q96K76 SNORA3.3-201ENST00000408712 125 ntBASIC5.3□□□□□ -1.56
USP47Q96K76 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.3□□□□□ -1.56
USP47Q96K76 AC091390.3-201ENST00000426478 338 ntBASIC5.3□□□□□ -1.56
USP47Q96K76 ATP5HP2-201ENST00000433885 485 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms