Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 TMSB4XP1-201ENST00000424567 135 ntBASIC5.15□□□□□ -1.59
HERC6Q8IVU3 AL158073.1-201ENST00000426848 1104 ntBASIC5.15□□□□□ -1.59
HERC6Q8IVU3 RPS26P47-201ENST00000427219 348 ntBASIC5.15□□□□□ -1.59
HERC6Q8IVU3 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.15□□□□□ -1.59
HERC6Q8IVU3 AC234064.1-201ENST00000436312 247 ntBASIC5.15□□□□□ -1.59
HERC6Q8IVU3 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.15□□□□□ -1.59
HERC6Q8IVU3 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HERC6Q8IVU3 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.15□□□□□ -1.59
HERC6Q8IVU3 MTND6P6-201ENST00000478031 263 ntBASIC5.15□□□□□ -1.59
HERC6Q8IVU3 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.15□□□□□ -1.59
HERC6Q8IVU3 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.15□□□□□ -1.59
HERC6Q8IVU3 AC015795.1-201ENST00000513669 327 ntBASIC5.15□□□□□ -1.59
HERC6Q8IVU3 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.15□□□□□ -1.59
HERC6Q8IVU3 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.15□□□□□ -1.59
HERC6Q8IVU3 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.15□□□□□ -1.59
HERC6Q8IVU3 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HERC6Q8IVU3 AC006349.1-201ENST00000555526 235 ntBASIC5.15□□□□□ -1.59
HERC6Q8IVU3 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.15□□□□□ -1.59
HERC6Q8IVU3 AC106785.1-201ENST00000565935 262 ntBASIC5.15□□□□□ -1.59
HERC6Q8IVU3 AC027455.1-201ENST00000574104 594 ntBASIC5.15□□□□□ -1.59
HERC6Q8IVU3 MTCO1P40-201ENST00000574371 625 ntBASIC5.15□□□□□ -1.59
HERC6Q8IVU3 AC093227.2-201ENST00000589357 285 ntBASIC5.15□□□□□ -1.59
HERC6Q8IVU3 PCNAP1-202ENST00000595299 752 ntBASIC5.15□□□□□ -1.59
HERC6Q8IVU3 AC096553.1-201ENST00000605169 829 ntBASIC5.15□□□□□ -1.59
HERC6Q8IVU3 AC023043.4-201ENST00000612081 449 ntBASIC5.15□□□□□ -1.59
HERC6Q8IVU3 AC104985.3-201ENST00000623479 597 ntBASIC5.15□□□□□ -1.59
HERC6Q8IVU3 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HERC6Q8IVU3 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.15□□□□□ -1.59
HERC6Q8IVU3 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
HERC6Q8IVU3 SMG1P4-204ENST00000523028 4131 ntBASIC5.15□□□□□ -1.59
HERC6Q8IVU3 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.15□□□□□ -1.59
HERC6Q8IVU3 AL049737.1-201ENST00000413920 1403 ntBASIC5.14□□□□□ -1.59
HERC6Q8IVU3 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 AC000374.1-201ENST00000434698 1745 ntBASIC5.14□□□□□ -1.59
HERC6Q8IVU3 AL451142.2-201ENST00000429076 2090 ntBASIC5.14□□□□□ -1.59
HERC6Q8IVU3 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 RNU1-64P-201ENST00000365443 163 ntBASIC5.14□□□□□ -1.59
HERC6Q8IVU3 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 SNORA70C-201ENST00000384538 135 ntBASIC5.14□□□□□ -1.59
HERC6Q8IVU3 MCTS2P-201ENST00000394552 546 ntBASIC5.14□□□□□ -1.59
HERC6Q8IVU3 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 SETP15-201ENST00000412724 337 ntBASIC5.14□□□□□ -1.59
HERC6Q8IVU3 RPS7P9-201ENST00000414704 586 ntBASIC5.14□□□□□ -1.59
HERC6Q8IVU3 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.14□□□□□ -1.59
HERC6Q8IVU3 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 AL358176.3-201ENST00000420757 454 ntBASIC5.14□□□□□ -1.59
HERC6Q8IVU3 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 GTF2IP3-201ENST00000433887 494 ntBASIC5.14□□□□□ -1.59
HERC6Q8IVU3 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 MTCYBP42-201ENST00000444653 1130 ntBASIC5.14□□□□□ -1.59
HERC6Q8IVU3 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 NIFKP7-201ENST00000503365 834 ntBASIC5.14□□□□□ -1.59
HERC6Q8IVU3 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 AC010460.2-201ENST00000509054 677 ntBASIC5.14□□□□□ -1.59
HERC6Q8IVU3 AP001207.2-201ENST00000519490 539 ntBASIC5.14□□□□□ -1.59
HERC6Q8IVU3 IGJP1-201ENST00000522682 475 ntBASIC5.14□□□□□ -1.59
HERC6Q8IVU3 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 RPAP2P1-201ENST00000603626 1168 ntBASIC5.14□□□□□ -1.59
HERC6Q8IVU3 AC115286.1-201ENST00000604298 434 ntBASIC5.14□□□□□ -1.59
HERC6Q8IVU3 AC002487.1-201ENST00000604565 994 ntBASIC5.14□□□□□ -1.59
HERC6Q8IVU3 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 AC234782.5-201ENST00000617723 324 ntBASIC5.14□□□□□ -1.59
HERC6Q8IVU3 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 SMG1P6-201ENST00000532337 2930 ntBASIC5.14□□□□□ -1.59
HERC6Q8IVU3 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 AC111188.2-201ENST00000529697 1387 ntBASIC5.14□□□□□ -1.59
HERC6Q8IVU3 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HERC6Q8IVU3 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HERC6Q8IVU3 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HERC6Q8IVU3 TLK1P1-201ENST00000456760 2440 ntBASIC5.13□□□□□ -1.59
HERC6Q8IVU3 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.13□□□□□ -1.59
HERC6Q8IVU3 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HERC6Q8IVU3 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.13□□□□□ -1.59
HERC6Q8IVU3 RNU1-82P-201ENST00000390851 165 ntBASIC5.13□□□□□ -1.59
HERC6Q8IVU3 RN7SKP16-201ENST00000410180 299 ntBASIC5.13□□□□□ -1.59
HERC6Q8IVU3 RPL21P108-201ENST00000413857 481 ntBASIC5.13□□□□□ -1.59
HERC6Q8IVU3 OR13Z1P-201ENST00000416141 834 ntBASIC5.13□□□□□ -1.59
HERC6Q8IVU3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.13□□□□□ -1.59
HERC6Q8IVU3 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.13□□□□□ -1.59
HERC6Q8IVU3 RAD23BP1-201ENST00000421404 1227 ntBASIC5.13□□□□□ -1.59
HERC6Q8IVU3 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.13□□□□□ -1.59
HERC6Q8IVU3 RPS17P8-201ENST00000434525 335 ntBASIC5.13□□□□□ -1.59
HERC6Q8IVU3 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.13□□□□□ -1.59
HERC6Q8IVU3 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms