Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.38□□□□□ -1.71
SHFQ7M4L6 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHFQ7M4L6 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.38□□□□□ -1.71
SHFQ7M4L6 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.38□□□□□ -1.71
SHFQ7M4L6 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.38□□□□□ -1.71
SHFQ7M4L6 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.38□□□□□ -1.71
SHFQ7M4L6 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.38□□□□□ -1.71
SHFQ7M4L6 TXNL1P1-201ENST00000429528 554 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 MTCO1P54-201ENST00000430139 712 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 CFL1P1-202ENST00000432948 411 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 MTND1P32-201ENST00000433043 938 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.38□□□□□ -1.71
SHFQ7M4L6 COX6CP18-201ENST00000448769 222 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 NPM1P39-201ENST00000449818 867 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 AC026348.1-201ENST00000462549 1053 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.38□□□□□ -1.71
SHFQ7M4L6 RPS4XP1-201ENST00000482189 787 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SHFQ7M4L6 RPS3AP22-201ENST00000488297 769 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 RN7SL244P-201ENST00000493405 297 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SHFQ7M4L6 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SHFQ7M4L6 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SHFQ7M4L6 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.38□□□□□ -1.71
SHFQ7M4L6 NDUFB4P12-201ENST00000513465 390 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 AC008494.2-201ENST00000514544 370 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SHFQ7M4L6 RNA5SP362-201ENST00000516048 118 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.38□□□□□ -1.71
SHFQ7M4L6 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.38□□□□□ -1.71
SHFQ7M4L6 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.38□□□□□ -1.71
SHFQ7M4L6 AP001317.1-201ENST00000531194 960 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.38□□□□□ -1.71
SHFQ7M4L6 AC004217.3-201ENST00000551552 878 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.38□□□□□ -1.71
SHFQ7M4L6 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.38□□□□□ -1.71
SHFQ7M4L6 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.38□□□□□ -1.71
SHFQ7M4L6 AC087465.1-201ENST00000560574 245 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 TVP23CP2-201ENST00000571473 623 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 AC105254.2-201ENST00000603636 436 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 DPRXP5-201ENST00000604662 539 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 AL133507.1-201ENST00000605269 557 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 AC097505.1-201ENST00000610199 565 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 AC023158.2-201ENST00000614876 543 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 AC234782.5-201ENST00000617723 324 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 AC007490.1-201ENST00000624321 703 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 CDRT1-208ENST00000630868 794 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 AL049767.1-202ENST00000637826 242 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.38□□□□□ -1.71
SHFQ7M4L6 AC009313.2-201ENST00000417893 1941 ntBASIC4.38□□□□□ -1.71
SHFQ7M4L6 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHFQ7M4L6 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHFQ7M4L6 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHFQ7M4L6 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHFQ7M4L6 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SHFQ7M4L6 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.37□□□□□ -1.71
SHFQ7M4L6 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHFQ7M4L6 TLK1P1-201ENST00000456760 2440 ntBASIC4.37□□□□□ -1.71
SHFQ7M4L6 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SHFQ7M4L6 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SHFQ7M4L6 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHFQ7M4L6 HMGB1P5-201ENST00000255320 642 ntBASIC4.37□□□□□ -1.71
SHFQ7M4L6 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHFQ7M4L6 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHFQ7M4L6 RN7SKP160-201ENST00000363804 340 ntBASIC4.37□□□□□ -1.71
SHFQ7M4L6 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.37□□□□□ -1.71
SHFQ7M4L6 RNU6-157P-201ENST00000383957 107 ntBASIC4.37□□□□□ -1.71
SHFQ7M4L6 MIR217-201ENST00000384817 110 ntBASIC4.37□□□□□ -1.71
SHFQ7M4L6 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SHFQ7M4L6 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
SHFQ7M4L6 AL357515.1-201ENST00000402967 542 ntBASIC4.37□□□□□ -1.71
SHFQ7M4L6 U3.35-201ENST00000408405 208 ntBASIC4.37□□□□□ -1.71
SHFQ7M4L6 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.37□□□□□ -1.71
SHFQ7M4L6 NPM1P4-201ENST00000414095 812 ntBASIC4.37□□□□□ -1.71
SHFQ7M4L6 PAICSP7-201ENST00000419829 962 ntBASIC4.37□□□□□ -1.71
SHFQ7M4L6 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.37□□□□□ -1.71
SHFQ7M4L6 RPL7P53-201ENST00000421245 739 ntBASIC4.37□□□□□ -1.71
SHFQ7M4L6 RPL7P44-201ENST00000424827 742 ntBASIC4.37□□□□□ -1.71
SHFQ7M4L6 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.37□□□□□ -1.71
SHFQ7M4L6 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.37□□□□□ -1.71
SHFQ7M4L6 AC079807.1-201ENST00000429993 481 ntBASIC4.37□□□□□ -1.71
SHFQ7M4L6 OR52B5P-201ENST00000435337 951 ntBASIC4.37□□□□□ -1.71
SHFQ7M4L6 AC004938.1-201ENST00000438468 308 ntBASIC4.37□□□□□ -1.71
SHFQ7M4L6 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.37□□□□□ -1.71
SHFQ7M4L6 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.37□□□□□ -1.71
SHFQ7M4L6 FHP1-201ENST00000442741 703 ntBASIC4.37□□□□□ -1.71
SHFQ7M4L6 Z80107.2-201ENST00000445127 392 ntBASIC4.37□□□□□ -1.71
SHFQ7M4L6 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.37□□□□□ -1.71
SHFQ7M4L6 RPL7L1P1-201ENST00000448259 785 ntBASIC4.37□□□□□ -1.71
SHFQ7M4L6 AC104978.1-201ENST00000449387 391 ntBASIC4.37□□□□□ -1.71
SHFQ7M4L6 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.37□□□□□ -1.71
SHFQ7M4L6 TPMTP4-201ENST00000450749 678 ntBASIC4.37□□□□□ -1.71
SHFQ7M4L6 AC243772.1-201ENST00000451620 410 ntBASIC4.37□□□□□ -1.71
SHFQ7M4L6 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.37□□□□□ -1.71
SHFQ7M4L6 ANKRD26P4-201ENST00000455755 950 ntBASIC4.37□□□□□ -1.71
SHFQ7M4L6 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.37□□□□□ -1.71
SHFQ7M4L6 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.37□□□□□ -1.71
SHFQ7M4L6 RPL7P51-201ENST00000490532 749 ntBASIC4.37□□□□□ -1.71
SHFQ7M4L6 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.37□□□□□ -1.71
SHFQ7M4L6 AC024558.1-201ENST00000505008 528 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms